(16 nodes) ABC transporter membrane protein permease protein ArtM/GltK/GlnP/TcyL/YhdX-like network (Marinobacter psychrophilus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AKO53511.1	Nickel transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
	AKO52559.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa)
	AKO53357.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)
	AKO53391.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
	AKO53392.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
	AKO52281.1	Nickel transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)
	AKO53664.1	Amino acid ABC transporter permease; With HisJPQ is involved in transport of histidine, lysine, arginine and ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)
	AKO52560.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (362 aa)
	AKO52791.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)
	AKO54320.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
	AKO53025.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (224 aa)
	AKO53356.1	Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)
	AKO52282.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)
	AKO51176.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
	AKO51177.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)
	AKO52217.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)

Your Current Organism:

Marinobacter psychrophilus

NCBI taxonomy Id: 330734
Other names: CGMCC 1.6499, JCM 14643, M. psychrophilus, Marinobacter psychrophilus Zhang et al. 2008, Marinobacter sp. BSi20041, strain 20041

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKO51176.1	AKO51177.1	ABA45_01005	ABA45_01010	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.876
AKO51176.1	AKO52217.1	ABA45_01005	ABA45_07065	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.505
AKO51176.1	AKO52281.1	ABA45_01005	ABA45_07445	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nickel transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.491
AKO51176.1	AKO52282.1	ABA45_01005	ABA45_07450	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.491
AKO51176.1	AKO52559.1	ABA45_01005	ABA45_09165	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.549
AKO51176.1	AKO52560.1	ABA45_01005	ABA45_09170	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.553
AKO51176.1	AKO52791.1	ABA45_01005	ABA45_10555	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.476
AKO51176.1	AKO53025.1	ABA45_01005	ABA45_11945	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.510
AKO51176.1	AKO53356.1	ABA45_01005	ABA45_13785	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.609
AKO51176.1	AKO53357.1	ABA45_01005	ABA45_13790	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.504
AKO51176.1	AKO53391.1	ABA45_01005	ABA45_14000	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.487
AKO51176.1	AKO53392.1	ABA45_01005	ABA45_14005	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.500
AKO51176.1	AKO53511.1	ABA45_01005	ABA45_14715	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nickel transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.478
AKO51176.1	AKO53664.1	ABA45_01005	ABA45_15540	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; With HisJPQ is involved in transport of histidine, lysine, arginine and ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.528
AKO51176.1	AKO54320.1	ABA45_01005	ABA45_10560	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.482
AKO51177.1	AKO51176.1	ABA45_01010	ABA45_01005	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.876
AKO51177.1	AKO52217.1	ABA45_01010	ABA45_07065	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.505
AKO51177.1	AKO52281.1	ABA45_01010	ABA45_07445	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nickel transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.519
AKO51177.1	AKO52282.1	ABA45_01010	ABA45_07450	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.524
AKO51177.1	AKO52559.1	ABA45_01010	ABA45_09165	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.549

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