STRINGSTRING
AKO53915.1 AKO53915.1 AKO54419.1 AKO54419.1 AKO52454.1 AKO52454.1 AKO51721.1 AKO51721.1 AKO51720.1 AKO51720.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AKO53915.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (624 aa)
AKO54419.1Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (669 aa)
AKO52454.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (591 aa)
AKO51721.1Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)
AKO51720.1Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (331 aa)
Your Current Organism:
Marinobacter psychrophilus
NCBI taxonomy Id: 330734
Other names: CGMCC 1.6499, JCM 14643, M. psychrophilus, Marinobacter psychrophilus Zhang et al. 2008, Marinobacter sp. BSi20041, strain 20041
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