STRINGSTRING
rps4 rps4 rps11 rps11 rpl18e rpl18e rps9 rps9 rpl34e rpl34e rpl30 rpl30 rps14 rps14 rpl24 rpl24 rpl29 rpl29 rpl37ae rpl37ae rpl15e rpl15e rps3ae rps3ae rpl21e rpl21e rps17e rps17e rpl30e rpl30e rps28e rps28e rpl14e rpl14e rps15 rps15 rps6e rps6e rpl44e rpl44e rpl1 rpl1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rps430S ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (176 aa)
rps1130S ribosomal protein S11P; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. (132 aa)
rpl18e50S ribosomal protein L18E; HL29e; Belongs to the eukaryotic ribosomal protein eL18 family. (110 aa)
rps930S ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. (138 aa)
rpl34e50S ribosomal protein L34E; Belongs to the eukaryotic ribosomal protein eL34 family. (87 aa)
rpl3050S ribosomal protein L30P. (156 aa)
rps1430S ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles. (63 aa)
rpl2450S ribosomal protein L24AB; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (134 aa)
rpl2950S ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family. (69 aa)
rpl37ae50S ribosomal protein L37AE; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL43 family. Putative zinc-binding subfamily. (70 aa)
rpl15e50S ribosomal protein L15E; Belongs to the eukaryotic ribosomal protein eL15 family. (217 aa)
rps3ae30S ribosomal protein S3AE; Belongs to the eukaryotic ribosomal protein eS1 family. (197 aa)
rpl21e50S ribosomal protein L21E; Belongs to the eukaryotic ribosomal protein eL21 family. (103 aa)
rps17e30S ribosomal protein S17E; Belongs to the eukaryotic ribosomal protein eS17 family. (82 aa)
rpl30e50S ribosomal protein L30E; Belongs to the eukaryotic ribosomal protein eL30 family. (104 aa)
rps28e30S ribosomal protein S28E; Belongs to the eukaryotic ribosomal protein eS28 family. (84 aa)
rpl14e50S ribosomal protein L14E; Belongs to the eukaryotic ribosomal protein eL14 family. (96 aa)
rps1530S ribosomal protein S15P. (153 aa)
rps6e30S ribosomal protein S6E; Full length match to SSO0411 but only N-terminal match to the sequences in COG2125; Belongs to the eukaryotic ribosomal protein eS6 family. (213 aa)
rpl44e50S ribosomal protein L44E; Binds to the 23S rRNA. (95 aa)
rpl150S ribosomal protein L1P; Probably involved in E site tRNA release (By similarity). Binds directly to 23S rRNA. (178 aa)
Your Current Organism:
Sulfolobus acidocaldarius DSM 639
NCBI taxonomy Id: 330779
Other names: S. acidocaldarius DSM 639, Sulfolobus acidocaldarius ATCC 33909, Sulfolobus acidocaldarius NCIB 11770
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