STRINGSTRING
hpaA hpaA Saci_2293 Saci_2293 Saci_2291 Saci_2291 paaK paaK Saci_2288 Saci_2288 paaF-3 paaF-3 paaF-2 paaF-2 cutB cutB Saci_2246 Saci_2246 acd-3 acd-3 Saci_2233 Saci_2233 Saci_2232 Saci_2232 Saci_2231 Saci_2231 Saci_2230 Saci_2230 Saci_2218 Saci_2218 Saci_2217 Saci_2217 Saci_2210 Saci_2210 Saci_2209 Saci_2209 Saci_2208 Saci_2208 Saci_2196 Saci_2196 Saci_2150 Saci_2150 Saci_2149 Saci_2149 Saci_2146 Saci_2146 abfD abfD Saci_2130 Saci_2130 Saci_2074 Saci_2074 Saci_2063 Saci_2063 Saci_2056 Saci_2056 glpK2 glpK2 Saci_2012 Saci_2012 Saci_1969 Saci_1969 Saci_1968 Saci_1968 Saci_1967 Saci_1967 Saci_1965 Saci_1965 Saci_1939 Saci_1939 Saci_1938 Saci_1938 Saci_1862 Saci_1862 Saci_1852 Saci_1852 Saci_1844 Saci_1844 Saci_1843 Saci_1843 Saci_1836 Saci_1836 treH1 treH1 Saci_1807 Saci_1807 Saci_1792 Saci_1792 Saci_1781 Saci_1781 Saci_1778 Saci_1778 crt crt Saci_1771 Saci_1771 Saci_1770 Saci_1770 Saci_1767 Saci_1767 Saci_1759 Saci_1759 Saci_1758 Saci_1758 Saci_1729 Saci_1729 Saci_1728 Saci_1728 acd-2 acd-2 Saci_1648 Saci_1648 paaF paaF pdxT pdxT Saci_1517 Saci_1517 Saci_1512 Saci_1512 gcvH gcvH gcsT gcsT gcvPA gcvPA gcvP gcvP eno eno sph1 sph1 acaB1 acaB1 Saci_1360 Saci_1360 gap gap pgk pgk Saci_1253 Saci_1253 treH2 treH2 mtaP mtaP Saci_1246 Saci_1246 Saci_1232 Saci_1232 Saci_1195 Saci_1195 Saci_1188 Saci_1188 Saci_1134 Saci_1134 Saci_1123 Saci_1123 Saci_1121 Saci_1121 Saci_1120 Saci_1120 glpK1 glpK1 Saci_1114 Saci_1114 Saci_1113 Saci_1113 Saci_1110 Saci_1110 Saci_1109 Saci_1109 acd acd gdh gdh Saci_1103 Saci_1103 gdh-2 gdh-2 rph rph rrp4 rrp4 psmA psmA pan pan psmB1 psmB1 Saci_0702 Saci_0702 Saci_0713 Saci_0713 fen fen apgM apgM Saci_0849 Saci_0849 Saci_0885 Saci_0885 psmB2 psmB2 Saci_0916 Saci_0916 Saci_0930 Saci_0930 Saci_0941 Saci_0941 Saci_0954 Saci_0954 rnhB rnhB Saci_0963 Saci_0963 Saci_1021 Saci_1021 Saci_1033 Saci_1033 ivd ivd Saci_1071 Saci_1071 Saci_1078 Saci_1078 Saci_0037 Saci_0037 dtdA dtdA Saci_0043 Saci_0043 Saci_0062 Saci_0062 pelA pelA tpiA tpiA Saci_0123 Saci_0123 gdhA gdhA Saci_0158 Saci_0158 Saci_0166 Saci_0166 csl4 csl4 glcD glcD Saci_0238 Saci_0238 Saci_0244 Saci_0244 rbsK rbsK Saci_0274 Saci_0274 dld dld gcs3 gcs3 gcs2 gcs2 Saci_0385 Saci_0385 Saci_0410 Saci_0410 Saci_0425 Saci_0425 Saci_0427 Saci_0427 Saci_0458 Saci_0458 Saci_0553 Saci_0553 Saci_2328 Saci_2328 rrp42 rrp42
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hpaA4-hydroxyphenylacetate 3-monooxygenase, oxygenase component. (490 aa)
Saci_22934-hydroxyphenylacetate degradation bifunctionali somerase/decarboxylase. (280 aa)
Saci_2291Conserved Archaeal protein. (127 aa)
paaKPhenylacetate-coenzyme A ligase. (428 aa)
Saci_2288Nonspecific lipid-transfer protein. (386 aa)
paaF-3enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (256 aa)
paaF-2enoyl-CoA hydratase/isomerase. (247 aa)
cutBCarbon monoxide dehydrogenase medium chain; Component of the glyceraldehyde dehydrogenase which is involved the nonphosphorylated Entner-Doudoroff pathway. Catalyzes the oxidation of D-glyceraldehyde to yield glycerate. When the artificial electron acceptor 2,6-dichlorophenol-indophenol (Cl2Ind) is used, the enzyme shows a broad substrate range (glyceraldehyde-3-phosphate, formaldehyde, acetaldehyde, propionaldehyde and isobutyraldehyde), but is most active with D-glyceraldehyde. It is not known which acceptor is utilized in vivo. (281 aa)
Saci_2246Carbon monoxide dehydrogenase. (459 aa)
acd-3isovaleryl-CoA dehydrogenase. (374 aa)
Saci_2233acetyl-CoA C-acetyltransferase. (382 aa)
Saci_2232Conserved Archaeal acetyl-CoA acetyltransferase. (392 aa)
Saci_2231Conserved Archaeal protein. (165 aa)
Saci_2230Conserved protein. (144 aa)
Saci_2218Conserved 3-hydroxybutyryl-CoA. (639 aa)
Saci_2217acyl-CoA dehydrogenase. (399 aa)
Saci_2210Conserved Archaeal protein. (180 aa)
Saci_2209acetyl-CoA thiolase. (395 aa)
Saci_22083-hydroxybutyryl-CoA dehydrogenase; Split in two in many organisms. (657 aa)
Saci_2196Mandelate racemase. (372 aa)
Saci_2150Conserved Archaeal protein. (305 aa)
Saci_2149Fumarylacetoacetate (FAA) hydrolase. (315 aa)
Saci_2146phenylacetyl-CoA ligase; Conserved in Sulfolobus. (475 aa)
abfDGamma-aminobutyrate metabolism dehydratase/isomerase. (505 aa)
Saci_2130Oxidoreductase. (264 aa)
Saci_2074Conserved HD domain protein. (414 aa)
Saci_2063enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (254 aa)
Saci_2056Hypothetical protein. (316 aa)
glpK2Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. (497 aa)
Saci_2012Conserved protein; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family. (133 aa)
Saci_1969Conserved protein. (114 aa)
Saci_1968Conserved acetyl-CoA acetyltransferase. (386 aa)
Saci_1967Mandelate racemase/muconate lactonizing enzyme. (372 aa)
Saci_1965Short chain dehydrogenase. (244 aa)
Saci_1939Conserved protein. (292 aa)
Saci_1938Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (478 aa)
Saci_1862Conserved Archaeal protein. (97 aa)
Saci_1852Hypothetical protein; Similar to gi:15899268. (311 aa)
Saci_1844Hypothetical protein. (178 aa)
Saci_1843Hypothetical protein. (115 aa)
Saci_1836Amidohydrolase. (410 aa)
treH1Glycosyl hydrolase; Catalyzes the hydrolysis of alpha,alpha-trehalose into two molecules of D-glucose; Belongs to the glycosyl hydrolase 15 family. (558 aa)
Saci_1807Conserved Archaeal protein. (223 aa)
Saci_1792Short chain dehydrogenase. (304 aa)
Saci_1781Amidohydrolase. (400 aa)
Saci_1778acyl-CoA dehydrogenase; Similar to fragment of transposase ISC1225 from Sulfolobus solfataricus. (557 aa)
crt3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (267 aa)
Saci_1771Phenylacetic acid catabolic protein. (256 aa)
Saci_1770Phenylacetic acid catabolic protein. (231 aa)
Saci_1767Fumarylacetoacetate (FAA) hydrolase. (307 aa)
Saci_1759acetyl-CoA acetyltransferase. (382 aa)
Saci_1758Conserved Archaeal protein. (115 aa)
Saci_1729Hypothetical protein. (89 aa)
Saci_1728Nonspecific lipid-transfer protein. (376 aa)
acd-2Multicopy acyl-CoA dehydrogenase. (390 aa)
Saci_1648Pyruvate kinase; Belongs to the pyruvate kinase family. (441 aa)
paaF3-hydroxybutyryl-CoA dehydratase; Several copies; Belongs to the enoyl-CoA hydratase/isomerase family. (257 aa)
pdxTSNO glutamine amidotransferase; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. (200 aa)
Saci_1517Conserved protein. (400 aa)
Saci_1512Conserved Archaeal protein; Belongs to the UPF0173 family. (206 aa)
gcvHGlycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (138 aa)
gcsTAminomethyltransferase. (351 aa)
gcvPAGlycine dehydrogenase subunit 1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. (447 aa)
gcvPGlycine dehydrogenase. (505 aa)
enoEnolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (416 aa)
sph1S-adenosylmethionine decarboxylase proenzyme 1; Specifically catalyzes the decarboxylation of L-arginine to agmatine. Has no S-adenosylmethionine decarboxylase (AdoMetDC) activity; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. (130 aa)
acaB1acetyl-CoA acetyltransferases. (364 aa)
Saci_1360Conserved Archaeal protein. (137 aa)
gapGlyceraldehyde-3-phosphate dehydrogenase. (343 aa)
pgkPhosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (415 aa)
Saci_1253Conserved Crenarchaeal protein. (264 aa)
treH2Glycosyl hydrolases family 15 protein; Catalyzes the hydrolysis of alpha,alpha-trehalose into two molecules of D-glucose; Belongs to the glycosyl hydrolase 15 family. (576 aa)
mtaP5'-methylthioadenosine phosphorylase. (236 aa)
Saci_1246Conserved protein. (398 aa)
Saci_1232Short chain dehydrogenase. (255 aa)
Saci_1195Endoribonuclease L-PSP. (125 aa)
Saci_1188Alkyldihydroxyacetonephosphate synthase. (453 aa)
Saci_1134Hypothetical protein; Similar to 3-hydroxybutyryl-CoA dehydrogenase (N-term) and 3-hydroxybutyryl-CoA dehydratase (C-term); Belongs to the enoyl-CoA hydratase/isomerase family. (662 aa)
Saci_1123acyl-CoA dehydrogenase. (400 aa)
Saci_1121acetyl-CoA thiolase. (395 aa)
Saci_1120Conserved Archaeal protein. (175 aa)
glpK1Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. (498 aa)
Saci_1114Thiolase. (395 aa)
Saci_1113Matching Pfam: acyl-CoA dehydrogenase, C-terminal domaim. (302 aa)
Saci_1110Conserved protein. (306 aa)
Saci_11093-hydroxybutyryl-CoA dehydrogenase; Looks like fusion protein; sp:P52046, sp:P520 41; Belongs to the enoyl-CoA hydratase/isomerase family. (663 aa)
acdacyl-CoA dehydrogenase. (373 aa)
gdhGlucose 1-dehydrogenase. (252 aa)
Saci_1103Hydroxylase. (463 aa)
gdh-2Glucose 1-dehydrogenase; Catalyzes the NAD(P)(+)-dependent oxidation of D-glucose to D-gluconate via gluconolactone. Can utilize both NAD(+) and NADP(+) as electron acceptor. Is involved in the degradation of glucose through a non-phosphorylative variant of the Entner-Doudoroff pathway. (364 aa)
rphRibonuclease PH; Catalytic component of the exosome, which is a complex involved in RNA degradation. Has 3'->5' exoribonuclease activity. Can also synthesize heteropolymeric RNA-tails. (243 aa)
rrp4Conserved Archaeal KH domain protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome. (249 aa)
psmAProteasome alpha subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. (242 aa)
panProtease regulatory protein; ATPase which is responsible for recognizing, binding, unfolding and translocation of substrate proteins into the archaeal 20S proteasome core particle. Is essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C- termini of the proteasomal ATPase function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. Unfolding activity requires energy from ATP hydrolysis, whereas ATP binding alone promotes ATPase-20S pro [...] (396 aa)
psmB1Proteasome protease subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. (195 aa)
Saci_0702Conserved protein. (192 aa)
Saci_0713Threonine dehydratase. (404 aa)
fenXPG/RAD25 related endonuclease; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) [...] (331 aa)
apgM2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (413 aa)
Saci_0849Nucleoside-triphosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. (191 aa)
Saci_0885Conserved Prokaryal protein. (395 aa)
psmB2Proteasome beta subunit precursor; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. (203 aa)
Saci_0916Carbon monoxide dehydrogenase medium chain. (280 aa)
Saci_0930Inositol-1-monophosphatase. (267 aa)
Saci_0941Conserved thermophile protein; Similar to gi:15920755. (206 aa)
Saci_0954Conserved Archaeal protein; Similar to gi:15920742. (177 aa)
rnhBRibonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (212 aa)
Saci_0963acetyl-CoA acetyltransferase. (392 aa)
Saci_1021Conserved Crenarchaeal protein. (269 aa)
Saci_1033acyl-CoA dehydrogenase. (399 aa)
ivdisovaleryl-CoA dehydrogenase. (362 aa)
Saci_1071Conserved protein; acyl-CoA dehydrogenase, C-terminal domain. (267 aa)
Saci_10783-hydroxybutyryl-CoA dehydrogenase; Contains an archaeal insert (ca 281 to 300 AA); similar to sp:P52041. (396 aa)
Saci_0037Hypothetical protein. (351 aa)
dtdAConserved Archaeal protein; D-aminoacyl-tRNA deacylase with broad substrate specificity. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo. (237 aa)
Saci_0043Phosphoglycerate mutase. (208 aa)
Saci_0062methylmalonyl-CoA mutase C-terminal domain/subunit. (140 aa)
pelAConserved Archaeal protein; May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity. (342 aa)
tpiATriosephosphate isomerase P; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (230 aa)
Saci_0123Conserved protein. (198 aa)
gdhAGlutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (423 aa)
Saci_0158Short chain dehydrogenase. (262 aa)
Saci_0166Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (521 aa)
csl4Conserved Archaeal protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. (180 aa)
glcDGlycolate oxidase subunit. (458 aa)
Saci_0238Short chain dehydrogenase. (251 aa)
Saci_0244Carboxyvinyl-carboxyphosphonate phosphorylmutase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. (280 aa)
rbsKRibokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (288 aa)
Saci_0274Conserved protein; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family. (203 aa)
dldD-lactate dehydrogenase. (440 aa)
gcs3Glycine cleavage H-protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (146 aa)
gcs2Glycine cleavage H-protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (149 aa)
Saci_03853-hydroxyisobutyrate dehydrogenase. (287 aa)
Saci_0410Alcohol dehydrogenase. (339 aa)
Saci_0425Gamma-glutamyltranspeptidase. (479 aa)
Saci_0427Conserved Archaeal protein. (83 aa)
Saci_0458DNA/pantothenate metabolism flavoprotein. (409 aa)
Saci_0553Carbohydrate kinase. (287 aa)
Saci_2328Conserved protein. (273 aa)
rrp42Exosome complex exonuclease RRP43-like protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Contributes to the structuring of the Rrp41 active site. (276 aa)
Your Current Organism:
Sulfolobus acidocaldarius DSM 639
NCBI taxonomy Id: 330779
Other names: S. acidocaldarius DSM 639, Sulfolobus acidocaldarius ATCC 33909, Sulfolobus acidocaldarius NCIB 11770
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