STRINGSTRING
Saci_0158 Saci_0158 Saci_0238 Saci_0238 gdh gdh Saci_1308 Saci_1308 Saci_1965 Saci_1965 fadD fadD Saci_2207 Saci_2207
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Saci_0158Short chain dehydrogenase. (262 aa)
Saci_0238Short chain dehydrogenase. (251 aa)
gdhGlucose 1-dehydrogenase. (252 aa)
Saci_1308Short chain dehydrogenase; Similar to sp:P25529 7-alpha-hydroxysteroid dehydrogenase (EC 1.1.1.159). (265 aa)
Saci_1965Short chain dehydrogenase. (244 aa)
fadDlong-chain-fatty-acid-CoA ligase. (511 aa)
Saci_22074-coumarate-CoA ligase 1. (495 aa)
Your Current Organism:
Sulfolobus acidocaldarius DSM 639
NCBI taxonomy Id: 330779
Other names: S. acidocaldarius DSM 639, Sulfolobus acidocaldarius ATCC 33909, Sulfolobus acidocaldarius NCIB 11770
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