(7 nodes) Transcription export complex network (Aspergillus fumigatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AFUA_4G04330	THO complex subunit Tho1, putative. (673 aa)
	sub2	ATP-dependent RNA helicase sub2; ATP-binding RNA helicase involved in transcription elongation and required for the export of mRNA out of the nucleus. SUB2 plays also a role in pre-mRNA splicing and spliceosome assembly. May be involved in rDNA and telomeric silencing, and maintenance of genome integrity (By similarity); Belongs to the DEAD box helicase family. DECD subfamily. (448 aa)
	AFUA_6G07170	Uncharacterized protein. (212 aa)
	AFUA_4G12190	WD repeat-containing protein. (408 aa)
	AFUA_5G08310	RNA binding protein, putative. (334 aa)
	AFUA_5G13860	RNA annealing protein Yra1, putative. (170 aa)
	AFUA_2G08210	Uncharacterized protein. (337 aa)

Your Current Organism:

Aspergillus fumigatus

NCBI taxonomy Id: 330879
Other names: A. fumigatus Af293, Aspergillus fumigatus Af293

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFUA_2G08210	AFUA_4G04330	Q4X1Z8	Q4W9N3	Uncharacterized protein.	THO complex subunit Tho1, putative.	0.999
AFUA_2G08210	AFUA_4G12190	Q4X1Z8	Q4WQB0	Uncharacterized protein.	WD repeat-containing protein.	0.999
AFUA_2G08210	AFUA_5G08310	Q4X1Z8	Q4WUF9	Uncharacterized protein.	RNA binding protein, putative.	0.734
AFUA_2G08210	AFUA_5G13860	Q4X1Z8	Q4WVZ6	Uncharacterized protein.	RNA annealing protein Yra1, putative.	0.734
AFUA_2G08210	AFUA_6G07170	Q4X1Z8	Q4WN92	Uncharacterized protein.	Uncharacterized protein.	0.999
AFUA_2G08210	sub2	Q4X1Z8	Q4WCW2	Uncharacterized protein.	ATP-dependent RNA helicase sub2; ATP-binding RNA helicase involved in transcription elongation and required for the export of mRNA out of the nucleus. SUB2 plays also a role in pre-mRNA splicing and spliceosome assembly. May be involved in rDNA and telomeric silencing, and maintenance of genome integrity (By similarity); Belongs to the DEAD box helicase family. DECD subfamily.	0.965
AFUA_4G04330	AFUA_2G08210	Q4W9N3	Q4X1Z8	THO complex subunit Tho1, putative.	Uncharacterized protein.	0.999
AFUA_4G04330	AFUA_4G12190	Q4W9N3	Q4WQB0	THO complex subunit Tho1, putative.	WD repeat-containing protein.	0.999
AFUA_4G04330	AFUA_5G08310	Q4W9N3	Q4WUF9	THO complex subunit Tho1, putative.	RNA binding protein, putative.	0.973
AFUA_4G04330	AFUA_5G13860	Q4W9N3	Q4WVZ6	THO complex subunit Tho1, putative.	RNA annealing protein Yra1, putative.	0.973
AFUA_4G04330	AFUA_6G07170	Q4W9N3	Q4WN92	THO complex subunit Tho1, putative.	Uncharacterized protein.	0.999
AFUA_4G04330	sub2	Q4W9N3	Q4WCW2	THO complex subunit Tho1, putative.	ATP-dependent RNA helicase sub2; ATP-binding RNA helicase involved in transcription elongation and required for the export of mRNA out of the nucleus. SUB2 plays also a role in pre-mRNA splicing and spliceosome assembly. May be involved in rDNA and telomeric silencing, and maintenance of genome integrity (By similarity); Belongs to the DEAD box helicase family. DECD subfamily.	0.973
AFUA_4G12190	AFUA_2G08210	Q4WQB0	Q4X1Z8	WD repeat-containing protein.	Uncharacterized protein.	0.999
AFUA_4G12190	AFUA_4G04330	Q4WQB0	Q4W9N3	WD repeat-containing protein.	THO complex subunit Tho1, putative.	0.999
AFUA_4G12190	AFUA_5G08310	Q4WQB0	Q4WUF9	WD repeat-containing protein.	RNA binding protein, putative.	0.972
AFUA_4G12190	AFUA_5G13860	Q4WQB0	Q4WVZ6	WD repeat-containing protein.	RNA annealing protein Yra1, putative.	0.972
AFUA_4G12190	AFUA_6G07170	Q4WQB0	Q4WN92	WD repeat-containing protein.	Uncharacterized protein.	0.998
AFUA_4G12190	sub2	Q4WQB0	Q4WCW2	WD repeat-containing protein.	ATP-dependent RNA helicase sub2; ATP-binding RNA helicase involved in transcription elongation and required for the export of mRNA out of the nucleus. SUB2 plays also a role in pre-mRNA splicing and spliceosome assembly. May be involved in rDNA and telomeric silencing, and maintenance of genome integrity (By similarity); Belongs to the DEAD box helicase family. DECD subfamily.	0.945
AFUA_5G08310	AFUA_2G08210	Q4WUF9	Q4X1Z8	RNA binding protein, putative.	Uncharacterized protein.	0.734
AFUA_5G08310	AFUA_4G04330	Q4WUF9	Q4W9N3	RNA binding protein, putative.	THO complex subunit Tho1, putative.	0.973