STRINGSTRING
AFUA_4G11602 AFUA_4G11602 AFUA_2G15905 AFUA_2G15905 AFUA_5G12895 AFUA_5G12895 AFUA_4G11477 AFUA_4G11477 AFUA_6G06530 AFUA_6G06530 AFUA_6G06535 AFUA_6G06535 AFUA_6G10965 AFUA_6G10965 AFUA_1G03035 AFUA_1G03035 AFUA_1G03992 AFUA_1G03992 csm3 csm3 tof1 tof1 AFUA_7G01270 AFUA_7G01270 AFUA_8G04240 AFUA_8G04240 AFUA_6G04110 AFUA_6G04110 AFUA_6G05040 AFUA_6G05040 AFUA_5G01870 AFUA_5G01870 AFUA_5G02430 AFUA_5G02430 AFUA_5G02520 AFUA_5G02520 AFUA_7G03750 AFUA_7G03750 AFUA_7G04100 AFUA_7G04100 AFUA_7G04310 AFUA_7G04310 pob3 pob3 AFUA_7G05480 AFUA_7G05480 AFUA_2G06320 AFUA_2G06320 AFUA_2G06190 AFUA_2G06190 esa1 esa1 AFUA_2G04030 AFUA_2G04030 slx4 slx4 AFUA_2G02660 AFUA_2G02660 AFUA_2G01910 AFUA_2G01910 spt16 spt16 AFUA_1G07600 AFUA_1G07600 AFUA_1G07320 AFUA_1G07320 AFUA_1G07180 AFUA_1G07180 AFUA_1G04950 AFUA_1G04950 AFUA_1G04910 AFUA_1G04910 AFUA_1G04900 AFUA_1G04900 AFUA_1G03920 AFUA_1G03920 AFUA_1G03500 AFUA_1G03500 AFUA_1G03410 AFUA_1G03410 npl4 npl4 AFUA_1G02500 AFUA_1G02500 AFUA_1G02430 AFUA_1G02430 AFUA_6G14720 AFUA_6G14720 AFUA_6G14690 AFUA_6G14690 AFUA_6G14670 AFUA_6G14670 AFUA_6G13080 AFUA_6G13080 AFUA_6G11130 AFUA_6G11130 AFUA_6G10560 AFUA_6G10560 AFUA_6G10490 AFUA_6G10490 AFUA_6G08210 AFUA_6G08210 AFUA_4G06690 AFUA_4G06690 AFUA_4G07230 AFUA_4G07230 AFUA_4G07970 AFUA_4G07970 AFUA_4G08300 AFUA_4G08300 AFUA_4G10650 AFUA_4G10650 AFUA_4G11180 AFUA_4G11180 psf3 psf3 AFUA_4G12210 AFUA_4G12210 AFUA_4G12430 AFUA_4G12430 ccr4 ccr4 AFUA_1G15310 AFUA_1G15310 AFUA_1G10720 AFUA_1G10720 AFUA_1G10620 AFUA_1G10620 AFUA_1G10550 AFUA_1G10550 AFUA_1G10410 AFUA_1G10410 clf1 clf1 AFUA_1G10040 AFUA_1G10040 AFUA_1G10020 AFUA_1G10020 AFUA_5G07890 AFUA_5G07890 AFUA_5G08110 AFUA_5G08110 AFUA_5G10620 AFUA_5G10620 AFUA_5G10820 AFUA_5G10820 AFUA_5G10890 AFUA_5G10890 AFUA_5G11690 AFUA_5G11690 lig4 lig4 AFUA_5G12350 AFUA_5G12350 AFUA_5G12640 AFUA_5G12640 AFUA_5G13020 AFUA_5G13020 AFUA_5G13220 AFUA_5G13220 PIF1 PIF1 AFUA_5G13380 AFUA_5G13380 AFUA_5G13640 AFUA_5G13640 AFUA_5G14820 AFUA_5G14820 AFUA_3G05540 AFUA_3G05540 chl1 chl1 fen1 fen1 AFUA_3G06780 AFUA_3G06780 AFUA_3G08300 AFUA_3G08300 AFUA_3G09020 AFUA_3G09020 sld2 sld2 AFUA_3G09110 AFUA_3G09110 pol2 pol2 AFUA_3G10280 AFUA_3G10280 AFUA_3G11140 AFUA_3G11140 AFUA_3G13260 AFUA_3G13260 AFUA_3G14010 AFUA_3G14010 AFUA_2G17190 AFUA_2G17190 AFUA_2G17050 AFUA_2G17050 AFUA_2G16710 AFUA_2G16710 AFUA_2G16600 AFUA_2G16600 AFUA_2G14920 AFUA_2G14920 AFUA_2G12940 AFUA_2G12940 AFUA_2G12250 AFUA_2G12250 AFUA_2G12220 AFUA_2G12220 AFUA_2G11170 AFUA_2G11170 psf2 psf2 AFUA_2G10730 AFUA_2G10730 MCM7 MCM7 AFUA_2G09730 AFUA_2G09730 AFUA_2G09060 AFUA_2G09060 AFUA_2G09010 AFUA_2G09010
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AFUA_4G11602Cnn_1N domain-containing protein. (987 aa)
AFUA_2G15905Sister chromatid cohesion protein Dcc1, putative. (394 aa)
AFUA_5G12895SsDNA binding protein Ssb3, putative. (122 aa)
AFUA_4G11477Sucrase/ferredoxin-like family protein, putative. (368 aa)
AFUA_6G06530Uncharacterized protein. (249 aa)
AFUA_6G06535Uncharacterized protein. (192 aa)
AFUA_6G10965Apoptosis-inducing TAF9-like domain 1 family protein, putative. (110 aa)
AFUA_1G03035HD superfamily hydrolase, putative. (243 aa)
AFUA_1G03992CPSF_A domain-containing protein. (1285 aa)
csm3Chromosome segregation in meiosis protein 3; Forms a fork protection complex (FPC) with tof1 and which is required for chromosome segregation during meiosis and DNA damage repair. FPC coordinates leading and lagging strand synthesis and moves with the replication fork. FPC stabilizes replication forks in a configuration that is recognized by replication checkpoint sensors (By similarity). (270 aa)
tof1Topoisomerase 1-associated factor 1; Forms a fork protection complex (FPC) with csm3 and which is required for chromosome segregation during meiosis and DNA damage repair. FPC coordinates leading and lagging strand synthesis and moves with the replication fork. FPC stabilizes replication forks in a configuration that is recognized by replication checkpoint sensors (By similarity). (1176 aa)
AFUA_7G01270DNA-directed polymerase kappa, putative. (614 aa)
AFUA_8G04240Origin recognition complex subunit 3, putative. (698 aa)
AFUA_6G04110CLPTM1 domain protein. (638 aa)
AFUA_6G05040DNA replication factor C subunit Rfc4, putative. (348 aa)
AFUA_5G01870DNA replication factor C subunit Rfc3, putative. (396 aa)
AFUA_5G02430ATP dependent DNA ligase domain protein. (912 aa)
AFUA_5G02520DNA helicase; Belongs to the MCM family. (718 aa)
AFUA_7G03750Cell-cycle checkpoint protein kinase, putative; Belongs to the protein kinase superfamily. (409 aa)
AFUA_7G04100Rtf2 domain-containing protein. (293 aa)
AFUA_7G04310Cell division control protein; Belongs to the CDC6/cdc18 family. (647 aa)
pob3FACT complex subunit pob3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (573 aa)
AFUA_7G05480Sister chromatid cohesion factor (Chl12), putative. (940 aa)
AFUA_2G06320Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (529 aa)
AFUA_2G06190DNA polymerase epsilon subunit B, putative. (762 aa)
esa1Histone acetyltransferase esa1; Catalytic component of the NuA4 histone acetyltransferase (HAT) complex which is involved in epigenetic transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4, H3, H2B, H2A and H2A variant H2A.Z. Acetylates histone H4 to form H4K5ac, H4K8ac, H4K12ac and H4K16ac, histone H3 to form H3K14ac, histone H2B to form H2BK16ac, and histone H2A to form H2AK4ac and H2AK7ac. Acetylation of histone H4 is essential for DNA double- strand break repair through homologous recombination. Involved in cell cycle progression. Recru [...] (483 aa)
AFUA_2G04030Chromatin assembly factor 1 subunit B, putative. (644 aa)
slx4Structure-specific endonuclease subunit slx4; Regulatory subunit of the slx1-slx4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (811 aa)
AFUA_2G02660DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (629 aa)
AFUA_2G01910MRC1 domain-containing protein. (1284 aa)
spt16FACT complex subunit spt16; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (1019 aa)
AFUA_1G07600Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (363 aa)
AFUA_1G07320Chromosome segregation protein (SepB), putative. (841 aa)
AFUA_1G07180Ribonuclease H, putative. (410 aa)
AFUA_1G04950Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (323 aa)
AFUA_1G04910Vezatin domain-containing protein. (629 aa)
AFUA_1G04900Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (219 aa)
AFUA_1G03920DNA helicase; Belongs to the MCM family. (892 aa)
AFUA_1G03500DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (998 aa)
AFUA_1G03410DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (500 aa)
npl4Nuclear protein localization protein 4; Involved in the import of nuclear-targeted proteins into the nucleus and the export of poly(A) RNA out of the nucleus. Has a role in the endoplasmic reticulum-associated degradation (ERAD) pathway (By similarity); Belongs to the NPL4 family. (652 aa)
AFUA_1G02500Origin recognition complex subunit Orc5, putative. (541 aa)
AFUA_1G02430Ubiquitin fusion degradation protein Ufd1, putative. (384 aa)
AFUA_6G14720Telomere-associated RecQ helicase, putative. (1445 aa)
AFUA_6G14690Telomere-associated RecQ helicase, putative. (352 aa)
AFUA_6G14670C2H2-type domain-containing protein. (146 aa)
AFUA_6G13080DEAD/DEAH box DNA helicase (Mer3), putative. (1439 aa)
AFUA_6G11130Possible replication factor-a protein. (289 aa)
AFUA_6G10560DNA polymerase delta subunit 4, putative. (193 aa)
AFUA_6G10490Uncharacterized protein. (441 aa)
AFUA_6G08210DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (266 aa)
AFUA_4G06690Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. (859 aa)
AFUA_4G07230ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (538 aa)
AFUA_4G07970DNA polymerase delta subunit 2, putative. (554 aa)
AFUA_4G08300DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1213 aa)
AFUA_4G10650Uncharacterized protein. (198 aa)
AFUA_4G11180AAA family ATPase, putative. (539 aa)
psf3DNA replication complex GINS protein psf3; The GINS complex plays an essential role in the initiation of DNA replication. (178 aa)
AFUA_4G12210DNA replication helicase Dna2, putative. (1657 aa)
AFUA_4G12430PSF1 domain protein. (253 aa)
ccr4Glucose-repressible alcohol dehydrogenase transcriptional effector; Acts as catalytic component of the CCR4-NOT core complex, which in the nucleus seems to be a general transcription factor, and in the cytoplasm the major mRNA deadenylase involved in mRNA turnover. Ccr4 has 3'-5' RNase activity with a strong preference for polyadenylated substrates and also low exonuclease activity towards single-stranded DNA. Discovered because of its role in the control of ADH2 gene expression. It is required for the expression of genes involved in non-fermentative growth (By similarity); Belongs to [...] (696 aa)
AFUA_1G15310DNA replication initiation factor Cdc45. (860 aa)
AFUA_1G10720Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (789 aa)
AFUA_1G10620SLD3 domain-containing protein. (933 aa)
AFUA_1G10550CBF/NF-Y family transcription factor, putative. (282 aa)
AFUA_1G10410DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. (348 aa)
clf1Pre-mRNA-splicing factor clf1; Involved in pre-mRNA splicing and cell cycle progression. Required for the spliceosome assembly and initiation of the DNA replication (By similarity). (676 aa)
AFUA_1G10040HMG box protein, putative. (399 aa)
AFUA_1G10020Ribonuclease H1, putative. (221 aa)
AFUA_5G07890SsDNA binding protein, putative. (149 aa)
AFUA_5G08110Origin recognition complex subunit 2, putative. (559 aa)
AFUA_5G10620Histone-like transcription factor, putative. (190 aa)
AFUA_5G10820Mitochondrial ATP-dependent RNA helicase Suv3, putative. (765 aa)
AFUA_5G10890DNA helicase; Belongs to the MCM family. (956 aa)
AFUA_5G11690Protein tyrosine phosphatase Pps1, putative. (551 aa)
lig4DNA ligase 4; Involved in ds DNA break repair. Has a role in non-homologous integration (NHI) pathways where it is required in the final step of non-homologous end-joining; Belongs to the ATP-dependent DNA ligase family. (979 aa)
AFUA_5G12350Ribonucleotide reductase small subunit RnrA, putative. (405 aa)
AFUA_5G12640DNA polymerase gamma. (1135 aa)
AFUA_5G13020DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (617 aa)
AFUA_5G13220ERCC4 domain-containing protein. (649 aa)
PIF1ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. (788 aa)
AFUA_5G13380BRCT domain protein. (786 aa)
AFUA_5G13640Thioredoxin, putative. (565 aa)
AFUA_5G14820Replication factor C subunit. (389 aa)
AFUA_3G05540Cell cycle protein kinase, putative. (464 aa)
chl1ATP-dependent DNA helicase chl1; ATP-dependent DNA helicase important for chromosome transmission and normal cell cycle progression in G(2)/M (By similarity). May have a role in changing DNA topology to allow the loading of proteins involved in maintaining sister chromatid cohesion in the vicinity of the centromeres (By similarity). Has a specific role in chromosome segregation during meiosis II (By similarity). (782 aa)
fen1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (395 aa)
AFUA_3G06780DNA polymerase. (1656 aa)
AFUA_3G08300DNA replication factor C subunit Rfc2, putative. (394 aa)
AFUA_3G09020DNA primase; Belongs to the eukaryotic-type primase small subunit family. (522 aa)
sld2DNA replication regulator sld2; Has a role in the initiation of DNA replication. Required at S-phase checkpoint (By similarity); Belongs to the SLD2 family. (535 aa)
AFUA_3G09110Uncharacterized protein. (289 aa)
pol2DNA polymerase epsilon catalytic subunit A; DNA polymerase II participates in chromosomal DNA replication. (2230 aa)
AFUA_3G10280DNA replication protein, putative. (792 aa)
AFUA_3G11140DNA ligase. (833 aa)
AFUA_3G13260Rad2-like endonuclease, putative. (869 aa)
AFUA_3G14010DNA helicase; Belongs to the MCM family. (896 aa)
AFUA_2G17190AAA domain-containing protein. (1129 aa)
AFUA_2G17050Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (692 aa)
AFUA_2G16710Uncharacterized protein. (438 aa)
AFUA_2G16600DNA polymerase. (1105 aa)
AFUA_2G14920Protein kinase, putative. (1028 aa)
AFUA_2G12940Uncharacterized protein. (2275 aa)
AFUA_2G12250DNA replication factor C subunit Rfc5, putative. (294 aa)
AFUA_2G12220Replication factor C subunit 1. (1085 aa)
AFUA_2G11170Origin recognition complex subunit Orc4, putative. (704 aa)
psf2DNA replication complex GINS protein psf2; The GINS complex plays an essential role in the initiation of DNA replication. Has a role in chromosome segregation (By similarity). (271 aa)
AFUA_2G10730DNA polymerase. (1462 aa)
MCM7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (854 aa)
AFUA_2G09730Uncharacterized protein. (319 aa)
AFUA_2G09060DNA helicase; Belongs to the MCM family. (1023 aa)
AFUA_2G09010DNA ligase. (909 aa)
Your Current Organism:
Aspergillus fumigatus
NCBI taxonomy Id: 330879
Other names: A. fumigatus Af293, Aspergillus fumigatus Af293
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