8 items (Aspergillus fumigatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AFUA_2G01900	RNA polymerase II transcription elongation factor Rtf1p, putative. (607 aa)
	ccr4	Glucose-repressible alcohol dehydrogenase transcriptional effector; Acts as catalytic component of the CCR4-NOT core complex, which in the nucleus seems to be a general transcription factor, and in the cytoplasm the major mRNA deadenylase involved in mRNA turnover. Ccr4 has 3'-5' RNase activity with a strong preference for polyadenylated substrates and also low exonuclease activity towards single-stranded DNA. Discovered because of its role in the control of ADH2 gene expression. It is required for the expression of genes involved in non-fermentative growth (By similarity); Belongs to [...] (696 aa)
	AFUA_1G09180	Uncharacterized protein. (470 aa)
	AFUA_1G08860	Meiotic recombination protein Ski8/Rec14, putative. (209 aa)
	AFUA_5G05870	RNA polymerase II transcription elongation factor (Ctr9), putative. (1195 aa)
	AFUA_3G11810	Uncharacterized protein. (605 aa)
	AFUA_2G11190	Pol II transcription elongation factor subunit Cdc73, putative. (471 aa)
	AFUA_2G11000	Uncharacterized protein. (562 aa)

Your Current Organism:

Aspergillus fumigatus

NCBI taxonomy Id: 330879
Other names: A. fumigatus Af293, Aspergillus fumigatus Af293

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFUA_1G08860	AFUA_1G09180	Q4WTL7	Q4WTI5	Meiotic recombination protein Ski8/Rec14, putative.	Uncharacterized protein.	0.930
AFUA_1G08860	AFUA_2G01900	Q4WTL7	Q4WIG8	Meiotic recombination protein Ski8/Rec14, putative.	RNA polymerase II transcription elongation factor Rtf1p, putative.	0.945
AFUA_1G08860	AFUA_2G11000	Q4WTL7	Q4X170	Meiotic recombination protein Ski8/Rec14, putative.	Uncharacterized protein.	0.998
AFUA_1G08860	AFUA_2G11190	Q4WTL7	Q4X151	Meiotic recombination protein Ski8/Rec14, putative.	Pol II transcription elongation factor subunit Cdc73, putative.	0.999
AFUA_1G08860	AFUA_3G11810	Q4WTL7	Q4WY51	Meiotic recombination protein Ski8/Rec14, putative.	Uncharacterized protein.	0.435
AFUA_1G08860	AFUA_5G05870	Q4WTL7	Q4WTR9	Meiotic recombination protein Ski8/Rec14, putative.	RNA polymerase II transcription elongation factor (Ctr9), putative.	0.998
AFUA_1G09180	AFUA_1G08860	Q4WTI5	Q4WTL7	Uncharacterized protein.	Meiotic recombination protein Ski8/Rec14, putative.	0.930
AFUA_1G09180	AFUA_2G01900	Q4WTI5	Q4WIG8	Uncharacterized protein.	RNA polymerase II transcription elongation factor Rtf1p, putative.	0.998
AFUA_1G09180	AFUA_2G11000	Q4WTI5	Q4X170	Uncharacterized protein.	Uncharacterized protein.	0.995
AFUA_1G09180	AFUA_2G11190	Q4WTI5	Q4X151	Uncharacterized protein.	Pol II transcription elongation factor subunit Cdc73, putative.	0.999
AFUA_1G09180	AFUA_3G11810	Q4WTI5	Q4WY51	Uncharacterized protein.	Uncharacterized protein.	0.956
AFUA_1G09180	AFUA_5G05870	Q4WTI5	Q4WTR9	Uncharacterized protein.	RNA polymerase II transcription elongation factor (Ctr9), putative.	0.999
AFUA_2G01900	AFUA_1G08860	Q4WIG8	Q4WTL7	RNA polymerase II transcription elongation factor Rtf1p, putative.	Meiotic recombination protein Ski8/Rec14, putative.	0.945
AFUA_2G01900	AFUA_1G09180	Q4WIG8	Q4WTI5	RNA polymerase II transcription elongation factor Rtf1p, putative.	Uncharacterized protein.	0.998
AFUA_2G01900	AFUA_2G11000	Q4WIG8	Q4X170	RNA polymerase II transcription elongation factor Rtf1p, putative.	Uncharacterized protein.	0.998
AFUA_2G01900	AFUA_2G11190	Q4WIG8	Q4X151	RNA polymerase II transcription elongation factor Rtf1p, putative.	Pol II transcription elongation factor subunit Cdc73, putative.	0.998
AFUA_2G01900	AFUA_3G11810	Q4WIG8	Q4WY51	RNA polymerase II transcription elongation factor Rtf1p, putative.	Uncharacterized protein.	0.910
AFUA_2G01900	AFUA_5G05870	Q4WIG8	Q4WTR9	RNA polymerase II transcription elongation factor Rtf1p, putative.	RNA polymerase II transcription elongation factor (Ctr9), putative.	0.999
AFUA_2G11000	AFUA_1G08860	Q4X170	Q4WTL7	Uncharacterized protein.	Meiotic recombination protein Ski8/Rec14, putative.	0.998
AFUA_2G11000	AFUA_1G09180	Q4X170	Q4WTI5	Uncharacterized protein.	Uncharacterized protein.	0.995