27 items (Aspergillus fumigatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AFUA_1G13580	M protein repeat protein. (731 aa)
	AFUA_2G08620	20S cyclosome subunit (BimA/Nuc2/Cdc27), putative. (809 aa)
	AFUA_3G14340	Mitotic spindle checkpoint protein (Mad2), putative. (141 aa)
	AFUA_3G13260	Rad2-like endonuclease, putative. (869 aa)
	AFUA_3G08100	Checkpoint protein kinase, putative. (841 aa)
	AFUA_3G06200	Anaphase-promoting complex subunit Apc5, putative. (768 aa)
	AFUA_5G13570	Uncharacterized protein. (292 aa)
	AFUA_5G13560	FHA domain protein. (610 aa)
	AFUA_1G15710	Anaphase-promoting complex component Cut20/Apc4, putative. (735 aa)
	AFUA_4G12110	TPR domain protein. (400 aa)
	AFUA_4G07620	Uncharacterized protein. (828 aa)
	AFUA_6G08120	Checkpoint protein kinase (SldA), putative. (1227 aa)
	AFUA_6G10620	Nuclear pore complex subunit, putative. (355 aa)
	AFUA_6G13170	Ubiquitin conjugating enzyme (UbcK), putative; Belongs to the ubiquitin-conjugating enzyme family. (181 aa)
	AFUA_1G03710	C2H2 finger domain protein, putative. (433 aa)
	AFUA_1G04950	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (323 aa)
	AFUA_1G05610	Protein phosphotase 2a 65kd regulatory sububit. (616 aa)
	AFUA_1G06660	CBS domain protein. (879 aa)
	AFUA_2G04140	Chromosome segregation protein Spc105, putative. (1559 aa)
	AFUA_5G02930	Lysophospholipase, putative. (560 aa)
	AFUA_5G02590	20S cyclosome subunit (Cut9/Cdc16), putative. (621 aa)
	AFUA_5G02440	20S cyclosome subunit (APC8), putative. (689 aa)
	AFUA_6G04110	CLPTM1 domain protein. (638 aa)
	AFUA_8G03960	Uncharacterized protein. (78 aa)
	AFUA_8G05680	Serine/threonine-protein kinase. (1119 aa)
	AFUA_7G01390	Uncharacterized protein. (383 aa)
	AFUA_7G01380	Anaphase promoting complex subunit Apc11, putative. (105 aa)

Your Current Organism:

Aspergillus fumigatus

NCBI taxonomy Id: 330879
Other names: A. fumigatus Af293, Aspergillus fumigatus Af293

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFUA_1G03710	AFUA_6G10620	Q4WK49	Q4WMA2	C2H2 finger domain protein, putative.	Nuclear pore complex subunit, putative.	0.937
AFUA_1G04950	AFUA_1G05610	Q4WJS6	Q4WJL0	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	Protein phosphotase 2a 65kd regulatory sububit.	0.715
AFUA_1G04950	AFUA_2G04140	Q4WJS6	Q4WHU7	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	Chromosome segregation protein Spc105, putative.	0.524
AFUA_1G04950	AFUA_3G14340	Q4WJS6	Q4WYU9	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	Mitotic spindle checkpoint protein (Mad2), putative.	0.536
AFUA_1G04950	AFUA_6G08120	Q4WJS6	Q4WN00	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	Checkpoint protein kinase (SldA), putative.	0.501
AFUA_1G04950	AFUA_6G10620	Q4WJS6	Q4WMA2	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	Nuclear pore complex subunit, putative.	0.483
AFUA_1G04950	AFUA_8G05680	Q4WJS6	Q4WC53	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	Serine/threonine-protein kinase.	0.736
AFUA_1G05610	AFUA_1G04950	Q4WJL0	Q4WJS6	Protein phosphotase 2a 65kd regulatory sububit.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.715
AFUA_1G05610	AFUA_3G14340	Q4WJL0	Q4WYU9	Protein phosphotase 2a 65kd regulatory sububit.	Mitotic spindle checkpoint protein (Mad2), putative.	0.767
AFUA_1G05610	AFUA_8G05680	Q4WJL0	Q4WC53	Protein phosphotase 2a 65kd regulatory sububit.	Serine/threonine-protein kinase.	0.616
AFUA_1G13580	AFUA_1G15710	E9R015	Q4WRN3	M protein repeat protein.	Anaphase-promoting complex component Cut20/Apc4, putative.	0.736
AFUA_1G13580	AFUA_2G08620	E9R015	Q4X1V7	M protein repeat protein.	20S cyclosome subunit (BimA/Nuc2/Cdc27), putative.	0.671
AFUA_1G13580	AFUA_3G06200	E9R015	Q4WWK5	M protein repeat protein.	Anaphase-promoting complex subunit Apc5, putative.	0.703
AFUA_1G13580	AFUA_3G08100	E9R015	Q4WX37	M protein repeat protein.	Checkpoint protein kinase, putative.	0.983
AFUA_1G13580	AFUA_3G14340	E9R015	Q4WYU9	M protein repeat protein.	Mitotic spindle checkpoint protein (Mad2), putative.	0.999
AFUA_1G13580	AFUA_4G07620	E9R015	Q4WP09	M protein repeat protein.	Uncharacterized protein.	0.606
AFUA_1G13580	AFUA_5G02440	E9R015	Q4WEB7	M protein repeat protein.	20S cyclosome subunit (APC8), putative.	0.740
AFUA_1G13580	AFUA_5G02590	E9R015	Q4WED2	M protein repeat protein.	20S cyclosome subunit (Cut9/Cdc16), putative.	0.746
AFUA_1G13580	AFUA_6G04110	E9R015	Q4WDB0	M protein repeat protein.	CLPTM1 domain protein.	0.580
AFUA_1G13580	AFUA_6G08120	E9R015	Q4WN00	M protein repeat protein.	Checkpoint protein kinase (SldA), putative.	0.978