15 items (Aspergillus fumigatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AFUA_3G10650	Glutamate carboxypeptidase Tre2, putative. (907 aa)
	AFUA_3G08730	Endosome-associated ubiquitin isopeptidase (AmsH), putative. (532 aa)
	AFUA_5G13890	SNF7 family protein. (229 aa)
	hulA	Probable E3 ubiquitin-protein ligase hulA; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Probably involved in the regulatory network controlling carbon source utilization. (813 aa)
	ssh4	Protein ssh4; Components of the endosome-vacuole trafficking pathway that regulates nutrient transport. May be involved in processes which determine whether plasma membrane proteins are degraded or routed to the plasma membrane (By similarity); Belongs to the SSH4 family. (507 aa)
	AFUA_1G16320	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (244 aa)
	AFUA_4G12290	ESCRT-II complex component (Vps25), putative. (195 aa)
	AFUA_1G06420	SNF7 family protein. (241 aa)
	AFUA_1G06680	VHS domain protein. (642 aa)
	hse1	Class E vacuolar protein-sorting machinery protein hse1; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB). (584 aa)
	vps27	Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. (729 aa)
	AFUA_2G05440	CTLH domain-containing protein. (229 aa)
	AFUA_4G03870	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (260 aa)
	AFUA_4G04100	Vacuolar protein sorting protein (Vps36), putative. (537 aa)
	bro1	Vacuolar protein-sorting protein bro1; Involved in concentration and sorting of cargo proteins of the multivesicular body (MVB) for incorporation into intralumenal vesicles; Belongs to the BRO1 family. (976 aa)

Your Current Organism:

Aspergillus fumigatus

NCBI taxonomy Id: 330879
Other names: A. fumigatus Af293, Aspergillus fumigatus Af293

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFUA_1G06420	AFUA_1G16320	Q4WJC9	Q4WRH2	SNF7 family protein.	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	0.932
AFUA_1G06420	AFUA_4G03870	Q4WJC9	Q4W9S7	SNF7 family protein.	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.	0.975
AFUA_1G06420	AFUA_4G04100	Q4WJC9	Q4W9Q5	SNF7 family protein.	Vacuolar protein sorting protein (Vps36), putative.	0.952
AFUA_1G06420	AFUA_4G12290	Q4WJC9	Q4WQC0	SNF7 family protein.	ESCRT-II complex component (Vps25), putative.	0.952
AFUA_1G06420	AFUA_5G13890	Q4WJC9	Q4WVZ8	SNF7 family protein.	SNF7 family protein.	0.999
AFUA_1G06420	bro1	Q4WJC9	Q4X0Z5	SNF7 family protein.	Vacuolar protein-sorting protein bro1; Involved in concentration and sorting of cargo proteins of the multivesicular body (MVB) for incorporation into intralumenal vesicles; Belongs to the BRO1 family.	0.933
AFUA_1G06420	hse1	Q4WJC9	Q4WHP5	SNF7 family protein.	Class E vacuolar protein-sorting machinery protein hse1; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB).	0.678
AFUA_1G06420	vps27	Q4WJC9	Q4WHN8	SNF7 family protein.	Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.	0.876
AFUA_1G06680	hulA	Q4WJA3	Q4WTF3	VHS domain protein.	Probable E3 ubiquitin-protein ligase hulA; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Probably involved in the regulatory network controlling carbon source utilization.	0.507
AFUA_1G16320	AFUA_1G06420	Q4WRH2	Q4WJC9	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	SNF7 family protein.	0.932
AFUA_1G16320	AFUA_4G03870	Q4WRH2	Q4W9S7	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.	0.951
AFUA_1G16320	AFUA_4G04100	Q4WRH2	Q4W9Q5	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Vacuolar protein sorting protein (Vps36), putative.	0.994
AFUA_1G16320	AFUA_4G12290	Q4WRH2	Q4WQC0	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	ESCRT-II complex component (Vps25), putative.	0.985
AFUA_1G16320	AFUA_5G13890	Q4WRH2	Q4WVZ8	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	SNF7 family protein.	0.931
AFUA_1G16320	hse1	Q4WRH2	Q4WHP5	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Class E vacuolar protein-sorting machinery protein hse1; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB).	0.787
AFUA_1G16320	vps27	Q4WRH2	Q4WHN8	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.	0.927
AFUA_2G05440	ssh4	Q4WHG9	Q4WRW0	CTLH domain-containing protein.	Protein ssh4; Components of the endosome-vacuole trafficking pathway that regulates nutrient transport. May be involved in processes which determine whether plasma membrane proteins are degraded or routed to the plasma membrane (By similarity); Belongs to the SSH4 family.	0.744
AFUA_3G08730	AFUA_5G13890	Q4WX98	Q4WVZ8	Endosome-associated ubiquitin isopeptidase (AmsH), putative.	SNF7 family protein.	0.828
AFUA_3G08730	hse1	Q4WX98	Q4WHP5	Endosome-associated ubiquitin isopeptidase (AmsH), putative.	Class E vacuolar protein-sorting machinery protein hse1; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB).	0.833
AFUA_3G10650	ssh4	Q4WXT7	Q4WRW0	Glutamate carboxypeptidase Tre2, putative.	Protein ssh4; Components of the endosome-vacuole trafficking pathway that regulates nutrient transport. May be involved in processes which determine whether plasma membrane proteins are degraded or routed to the plasma membrane (By similarity); Belongs to the SSH4 family.	0.530