36 items (Aspergillus fumigatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AFUA_4G12670	DNA repair protein Rad1, putative. (491 aa)
	AFUA_4G11990	Uncharacterized protein. (417 aa)
	AFUA_6G10670	Uncharacterized protein. (207 aa)
	AFUA_6G12700	DASH complex component Dam1, putative. (204 aa)
	AFUA_6G13050	Meiosis specific protein Hop1, putative. (732 aa)
	AFUA_6G13080	DEAD/DEAH box DNA helicase (Mer3), putative. (1439 aa)
	AFUA_1G02840	Uncharacterized protein. (485 aa)
	AFUA_2G02280	Mitotic spindle biogenesis protein Spc19, putative. (170 aa)
	AFUA_2G05850	Double-strand-break repair protein rad21. (606 aa)
	AFUA_3G03852	C2H2 type zinc finger domain protein. (957 aa)
	AFUA_1G14695	DNA repair protein Dds20/Mei5, putative. (286 aa)
	AFUA_3G10260	DASH complex subunit Duo1, putative. (255 aa)
	AFUA_3G13950	Mis12-Mtw1 family protein. (589 aa)
	AFUA_2G05990	TFIIIC_sub6 domain-containing protein. (293 aa)
	AFUA_3G01750	G protein coupled receptor family protein. (384 aa)
	AFUA_3G02070	C2H2 transcription factor, putative. (779 aa)
	AFUA_6G03970	Cell cycle checkpoint protein (Hus1), putative. (373 aa)
	AFUA_6G02900	Rad21/Rec8 N terminal domain protein. (741 aa)
	AFUA_6G02610	Uncharacterized protein. (125 aa)
	AFUA_8G06220	Uncharacterized protein. (935 aa)
	AFUA_7G02200	Meiotic recombination protein (Dmc1), putative; Belongs to the RecA family. (338 aa)
	AFUA_5G04135	cAMP receptor-like protein, putative. (413 aa)
	AFUA_5G04140	MIND kinetochore complex component Nnf1, putative. (226 aa)
	AFUA_3G06070	Histone H1. (206 aa)
	AFUA_5G14070	Uncharacterized protein. (124 aa)
	AFUA_2G17220	C2H2 transcription factor (AmdX), putative. (1195 aa)
	AFUA_5G09170	C2H2 finger domain protein, putative. (829 aa)
	AFUA_5G07690	Uncharacterized protein. (243 aa)
	AFUA_5G06410	C2H2 transcription factor (AmdA), putative. (877 aa)
	AFUA_1G10410	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. (348 aa)
	AFUA_2G10710	DNA repair protein rad9, putative. (376 aa)
	AFUA_2G14080	Structural maintenance of chromosomes protein. (1199 aa)
	AFUA_2G16230	C2H2 finger domain protein, putative. (806 aa)
	AFUA_2G16850	Sister chromatid cohesion and DNA repair protein (BimD), putative. (1492 aa)
	AFUA_1G12670	Uncharacterized protein. (426 aa)
	AFUA_1G16570	MIND kinetochore complex component Mtw1, putative. (335 aa)

Your Current Organism:

Aspergillus fumigatus

NCBI taxonomy Id: 330879
Other names: A. fumigatus Af293, Aspergillus fumigatus Af293

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFUA_1G02840	AFUA_1G16570	Q4WKD6	Q4WRE6	Uncharacterized protein.	MIND kinetochore complex component Mtw1, putative.	0.540
AFUA_1G02840	AFUA_3G13950	Q4WKD6	A4D9E3	Uncharacterized protein.	Mis12-Mtw1 family protein.	0.545
AFUA_1G02840	AFUA_5G04140	Q4WKD6	A4DA12	Uncharacterized protein.	MIND kinetochore complex component Nnf1, putative.	0.540
AFUA_1G10410	AFUA_1G14695	Q4WT63	A4D9K6	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	DNA repair protein Dds20/Mei5, putative.	0.734
AFUA_1G10410	AFUA_2G05850	Q4WT63	Q4WHC9	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	Double-strand-break repair protein rad21.	0.492
AFUA_1G10410	AFUA_2G10710	Q4WT63	Q4X199	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	DNA repair protein rad9, putative.	0.736
AFUA_1G10410	AFUA_2G14080	Q4WT63	Q4X0B2	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	Structural maintenance of chromosomes protein.	0.615
AFUA_1G10410	AFUA_2G16850	Q4WT63	Q4WZI1	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	Sister chromatid cohesion and DNA repair protein (BimD), putative.	0.476
AFUA_1G10410	AFUA_4G12670	Q4WT63	Q4WQF7	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	DNA repair protein Rad1, putative.	0.738
AFUA_1G10410	AFUA_6G02900	Q4WT63	Q4WCZ0	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	Rad21/Rec8 N terminal domain protein.	0.435
AFUA_1G10410	AFUA_6G03970	Q4WT63	Q4WD96	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	Cell cycle checkpoint protein (Hus1), putative.	0.660
AFUA_1G10410	AFUA_6G13050	Q4WT63	Q4WLM0	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	Meiosis specific protein Hop1, putative.	0.666
AFUA_1G10410	AFUA_7G02200	Q4WT63	Q4WAR2	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	Meiotic recombination protein (Dmc1), putative; Belongs to the RecA family.	0.962
AFUA_1G12670	AFUA_2G02280	Q4WSI3	Q4WID0	Uncharacterized protein.	Mitotic spindle biogenesis protein Spc19, putative.	0.887
AFUA_1G12670	AFUA_3G10260	Q4WSI3	A4D9E4	Uncharacterized protein.	DASH complex subunit Duo1, putative.	0.796
AFUA_1G12670	AFUA_4G11990	Q4WSI3	Q4WQ90	Uncharacterized protein.	Uncharacterized protein.	0.553
AFUA_1G12670	AFUA_5G14070	Q4WSI3	Q4WW14	Uncharacterized protein.	Uncharacterized protein.	0.803
AFUA_1G12670	AFUA_6G02610	Q4WSI3	Q4WCW0	Uncharacterized protein.	Uncharacterized protein.	0.548
AFUA_1G12670	AFUA_6G12700	Q4WSI3	Q4WLQ4	Uncharacterized protein.	DASH complex component Dam1, putative.	0.932
AFUA_1G14695	AFUA_1G10410	A4D9K6	Q4WT63	DNA repair protein Dds20/Mei5, putative.	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	0.734