(7 nodes) Microtubule end network (Aspergillus fumigatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AFUA_1G00730	DnaJ domain protein. (547 aa)
	AFUA_1G15460	DnaJ domain protein. (885 aa)
	AFUA_3G11860	Microtubule associated protein EB1, putative. (278 aa)
	AFUA_2G13450	Dynactin, putative. (1378 aa)
	AFUA_8G04140	Uncharacterized protein. (772 aa)
	AFUA_8G04660	Noc1p protein, putative. (679 aa)
	AFUA_1G07580	Cell polarity protein (Alp11), putative. (274 aa)

Your Current Organism:

Aspergillus fumigatus

NCBI taxonomy Id: 330879
Other names: A. fumigatus Af293, Aspergillus fumigatus Af293

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFUA_2G13450	AFUA_3G11860	Q4X0H5	Q4WY56	Dynactin, putative.	Microtubule associated protein EB1, putative.	0.740
AFUA_2G13450	AFUA_8G04660	Q4X0H5	Q4WCF0	Dynactin, putative.	Noc1p protein, putative.	0.733
AFUA_3G11860	AFUA_2G13450	Q4WY56	Q4X0H5	Microtubule associated protein EB1, putative.	Dynactin, putative.	0.740
AFUA_3G11860	AFUA_8G04140	Q4WY56	Q4WCK1	Microtubule associated protein EB1, putative.	Uncharacterized protein.	0.487
AFUA_3G11860	AFUA_8G04660	Q4WY56	Q4WCF0	Microtubule associated protein EB1, putative.	Noc1p protein, putative.	0.970
AFUA_8G04140	AFUA_3G11860	Q4WCK1	Q4WY56	Uncharacterized protein.	Microtubule associated protein EB1, putative.	0.487
AFUA_8G04660	AFUA_2G13450	Q4WCF0	Q4X0H5	Noc1p protein, putative.	Dynactin, putative.	0.733
AFUA_8G04660	AFUA_3G11860	Q4WCF0	Q4WY56	Noc1p protein, putative.	Microtubule associated protein EB1, putative.	0.970