STRINGSTRING
mus81 mus81 AFUA_3G09210 AFUA_3G09210 fen1 fen1 AFUA_5G11140 AFUA_5G11140 ysh1 ysh1 AFUA_6G10540 AFUA_6G10540 AFUA_6G10900 AFUA_6G10900 AFUA_6G11410 AFUA_6G11410 AFUA_1G01540 AFUA_1G01540 lcl3 lcl3 AFUA_1G07600 AFUA_1G07600 AFUA_2G02960 AFUA_2G02960 AFUA_2G03740 AFUA_2G03740 AFUA_7G03680 AFUA_7G03680 AFUA_5G04010 AFUA_5G04010 slx1 slx1 AFUA_6G02060 AFUA_6G02060 AFUA_m0430 AFUA_m0430 AFUA_2G13650 AFUA_2G13650 AFUA_2G08860 AFUA_2G08860 AFUA_2G08750 AFUA_2G08750 AFUA_2G16830 AFUA_2G16830 AFUA_3G13260 AFUA_3G13260 rny1 rny1
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
mus81Crossover junction endonuclease mus81; Interacts with eme1 to form a DNA structure-specific endonuclease with substrate preference for branched DNA structures with a 5'-end at the branch nick. Typical substrates include 3'-flap structures, D-loops, replication forks and nicked Holliday junctions. May be required in mitosis for the processing of stalled or collapsed replication fork intermediates. May be required in meiosis for the repair of meiosis-specific double strand breaks subsequent to single- end invasion (SEI) (By similarity); Belongs to the XPF family. (596 aa)
AFUA_3G09210Endonuclease/exonuclease/phosphatase family protein. (606 aa)
fen1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (395 aa)
AFUA_5G11140tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...] (310 aa)
ysh1Endoribonuclease ysh1; Component of the cleavage factor I (CF I) involved in pre- mRNA 3'-end processing; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. CPSF2/YSH1 subfamily. (872 aa)
AFUA_6G10540tRNA splicing endonuclease subunit (Sen54), putative. (460 aa)
AFUA_6G10900UV-endonuclease UVE-1. (598 aa)
AFUA_6G11410Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (784 aa)
AFUA_1G01540Endonuclease/exonuclease/phosphatase family protein. (439 aa)
lcl3Probable endonuclease lcl3. (296 aa)
AFUA_1G07600Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (363 aa)
AFUA_2G02960Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (410 aa)
AFUA_2G03740Exosome complex endonuclease 1/ribosomal RNA processing protein, putative. (269 aa)
AFUA_7G03680SacI domain and endonuclease/exonuclease/phosphatase family protein. (1160 aa)
AFUA_5G04010tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...] (484 aa)
slx1Structure-specific endonuclease subunit slx1; Catalytic subunit of the slx1-slx4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (423 aa)
AFUA_6G02060tRNA-splicing endonuclease, putative. (2076 aa)
AFUA_m0430Intron-encoded LAGLIDADG endonuclease family protein. (291 aa)
AFUA_2G13650Endonuclease/exonuclease/phosphatase family protein. (362 aa)
AFUA_2G08860Exosome complex endonuclease 2/ribosomal RNA processing protein, putative. (292 aa)
AFUA_2G08750Endonuclease. (340 aa)
AFUA_2G16830Endonuclease/exonuclease/phosphatase family protein. (300 aa)
AFUA_3G13260Rad2-like endonuclease, putative. (869 aa)
rny1Ribonuclease T2-like; Rnase which modulates cell survival under stress conditions. Released from the vacuole to the cytoplasm during stress to promote tRNA and rRNA cleavage and to activate separately a downstream pathway that promotes cell death. Involved in cell size, vacuolar morphology and growth at high temperatures and high salt concentration (By similarity). (408 aa)
Your Current Organism:
Aspergillus fumigatus
NCBI taxonomy Id: 330879
Other names: A. fumigatus Af293, Aspergillus fumigatus Af293
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