(12 nodes) (2015) New strategic insights into managing fungal biofilms. network (Aspergillus fumigatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AFUA_2G13430	Chitin synthase, putative. (1756 aa)
	AFUA_1G11890	Serine palmitoyltransferase 2, putative. (680 aa)
	chsG	Chitin synthase G; Plays a major role in cell wall biogenesis and required for normal hyphal growth and development. (911 aa)
	chsD	Chitin synthase D; Plays a major role in cell wall biogenesis. (745 aa)
	AFUA_6G00300	Serine palmitoyltransferase 1, putative. (613 aa)
	AFUA_4G04180	Chitin synthase B. (1084 aa)
	AFUA_8G05630	Chitin synthase F. (1182 aa)
	efg1	rRNA-processing protein efg1; Involved in rRNA processing; Belongs to the EFG1 family. (319 aa)
	AFUA_2G01870	Chitin synthase; Plays a major role in cell wall biogenesis. (933 aa)
	AFUA_6G12390	Serine palmitoyl CoA transferase subunit LcbA. (504 aa)
	AFUA_2G13440	Chitin synthase ChsE; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1848 aa)
	chsC	Chitin synthase C; Plays a major role in cell wall biogenesis. (893 aa)

Your Current Organism:

Aspergillus fumigatus

NCBI taxonomy Id: 330879
Other names: A. fumigatus Af293, Aspergillus fumigatus Af293

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFUA_1G11890	AFUA_6G00300	E9R3D1	Q4W8Y4	Serine palmitoyltransferase 2, putative.	Serine palmitoyltransferase 1, putative.	0.901
AFUA_1G11890	AFUA_6G12390	E9R3D1	Q4WLT5	Serine palmitoyltransferase 2, putative.	Serine palmitoyl CoA transferase subunit LcbA.	0.995
AFUA_6G00300	AFUA_1G11890	Q4W8Y4	E9R3D1	Serine palmitoyltransferase 1, putative.	Serine palmitoyltransferase 2, putative.	0.901
AFUA_6G00300	AFUA_6G12390	Q4W8Y4	Q4WLT5	Serine palmitoyltransferase 1, putative.	Serine palmitoyl CoA transferase subunit LcbA.	0.995
AFUA_6G12390	AFUA_1G11890	Q4WLT5	E9R3D1	Serine palmitoyl CoA transferase subunit LcbA.	Serine palmitoyltransferase 2, putative.	0.995
AFUA_6G12390	AFUA_6G00300	Q4WLT5	Q4W8Y4	Serine palmitoyl CoA transferase subunit LcbA.	Serine palmitoyltransferase 1, putative.	0.995
chsC	chsD	Q92197	P78746	Chitin synthase C; Plays a major role in cell wall biogenesis.	Chitin synthase D; Plays a major role in cell wall biogenesis.	0.653
chsD	chsC	P78746	Q92197	Chitin synthase D; Plays a major role in cell wall biogenesis.	Chitin synthase C; Plays a major role in cell wall biogenesis.	0.653