11 items (Aspergillus fischeri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NFIA_109620	Uncharacterized protein. (352 aa)
	NFIA_037160	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (166 aa)
	NFIA_013010	Uncharacterized protein. (1443 aa)
	NFIA_016570	Uncharacterized protein. (1265 aa)
	NFIA_114990	Trafficking protein particle complex subunit BET3. (189 aa)
	NFIA_074210	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic. (258 aa)
	NFIA_084310	Trafficking protein particle complex subunit 2/Sedlin, putative. (187 aa)
	NFIA_090330	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (176 aa)
	NFIA_091980	Uncharacterized protein. (740 aa)
	NFIA_051390	Hypercellular protein HypA. (1479 aa)
	NFIA_051800	BET3 family protein. (189 aa)

Your Current Organism:

Aspergillus fischeri

NCBI taxonomy Id: 331117
Other names: A. fischeri NRRL 181, Aspergillus fischeri NRRL 181, Neosartorya fischeri NRRL 181

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NFIA_013010	NFIA_016570	A1D2G9	A1D3G8	Uncharacterized protein.	Uncharacterized protein.	0.975
NFIA_013010	NFIA_037160	A1D2G9	A1CZH2	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.999
NFIA_013010	NFIA_051390	A1D2G9	A1DLX3	Uncharacterized protein.	Hypercellular protein HypA.	0.999
NFIA_013010	NFIA_051800	A1D2G9	A1DM14	Uncharacterized protein.	BET3 family protein.	0.969
NFIA_013010	NFIA_074210	A1D2G9	A1DDP8	Uncharacterized protein.	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	0.998
NFIA_013010	NFIA_084310	A1D2G9	A1DGH2	Uncharacterized protein.	Trafficking protein particle complex subunit 2/Sedlin, putative.	0.998
NFIA_013010	NFIA_090330	A1D2G9	A1DI68	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.997
NFIA_013010	NFIA_091980	A1D2G9	A1DIN1	Uncharacterized protein.	Uncharacterized protein.	0.982
NFIA_013010	NFIA_109620	A1D2G9	A1CXW6	Uncharacterized protein.	Uncharacterized protein.	0.975
NFIA_013010	NFIA_114990	A1D2G9	A1D9A5	Uncharacterized protein.	Trafficking protein particle complex subunit BET3.	0.998
NFIA_016570	NFIA_013010	A1D3G8	A1D2G9	Uncharacterized protein.	Uncharacterized protein.	0.975
NFIA_016570	NFIA_037160	A1D3G8	A1CZH2	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.994
NFIA_016570	NFIA_051390	A1D3G8	A1DLX3	Uncharacterized protein.	Hypercellular protein HypA.	0.977
NFIA_016570	NFIA_051800	A1D3G8	A1DM14	Uncharacterized protein.	BET3 family protein.	0.907
NFIA_016570	NFIA_074210	A1D3G8	A1DDP8	Uncharacterized protein.	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	0.995
NFIA_016570	NFIA_084310	A1D3G8	A1DGH2	Uncharacterized protein.	Trafficking protein particle complex subunit 2/Sedlin, putative.	0.995
NFIA_016570	NFIA_090330	A1D3G8	A1DI68	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.995
NFIA_016570	NFIA_091980	A1D3G8	A1DIN1	Uncharacterized protein.	Uncharacterized protein.	0.996
NFIA_016570	NFIA_109620	A1D3G8	A1CXW6	Uncharacterized protein.	Uncharacterized protein.	0.978
NFIA_016570	NFIA_114990	A1D3G8	A1D9A5	Uncharacterized protein.	Trafficking protein particle complex subunit BET3.	0.995