42 items (Aspergillus fischeri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NFIA_087410	Mitochondrial large ribosomal subunit protein L16, putative; Belongs to the universal ribosomal protein uL16 family. (231 aa)
	NFIA_085880	50S ribosomal protein L13. (172 aa)
	NFIA_092300	50S ribosomal subunit L30. (339 aa)
	NFIA_003210	Uncharacterized protein. (184 aa)
	NFIA_052540	KOW motif domain protein. (354 aa)
	NFIA_054720	60S ribosomal protein L6, putative; Belongs to the universal ribosomal protein uL6 family. (253 aa)
	NFIA_054970	Ribosomal protein L33, putative. (69 aa)
	NFIA_058580	50S ribosomal protein Mrp49. (204 aa)
	NFIA_069060	Aconitate hydratase, putative. (228 aa)
	NFIA_013590	50S ribosomal subunit protein L15. (315 aa)
	NFIA_012830	60S ribosomal protein L3. (406 aa)
	NFIA_038540	Mitochondrial large ribosomal subunit protein L1, putative. (276 aa)
	NFIA_038420	Uncharacterized protein. (280 aa)
	NFIA_038080	50S ribosomal protein L27, putative. (274 aa)
	NFIA_036700	50S ribosomal subunit L7, putative. (352 aa)
	NFIA_034180	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (354 aa)
	NFIA_110150	50S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (297 aa)
	NFIA_108595	60S ribosomal protein L34. (131 aa)
	NFIA_107170	60S ribosomal protein L25, putative. (202 aa)
	NFIA_106290	50S ribosomal protein L12. (190 aa)
	NFIA_106280	Uncharacterized protein. (504 aa)
	NFIA_105590	50S ribosomal protein L30, putative. (94 aa)
	NFIA_105350	50S ribosomal protein L24. (212 aa)
	NFIA_104090	50S ribosomal protein L2. (404 aa)
	NFIA_103510	50S ribosomal protein L36, putative. (169 aa)
	NFIA_069250	Uncharacterized protein. (247 aa)
	NFIA_071730	60S ribosomal protein L20, putative. (209 aa)
	NFIA_073570	Mitochondrial ribosomal protein L43, putative. (137 aa)
	NFIA_073710	Uncharacterized protein. (344 aa)
	NFIA_074360	Mitochondrial large ribosomal subunit YmL35, putative. (419 aa)
	NFIA_068750	Uncharacterized protein. (106 aa)
	NFIA_067540	Peptidyl-tRNA hydrolase domain protein. (173 aa)
	NFIA_066940	Uncharacterized protein. (216 aa)
	NFIA_065930	Mitochondrial large ribosomal subunit L49, putative. (182 aa)
	NFIA_020530	50S ribosomal protein YmL27. (132 aa)
	NFIA_016800	Ribosomal protein L32, putative. (118 aa)
	NFIA_016200	50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. (194 aa)
	NFIA_074370	50S ribosomal protein L4. (291 aa)
	NFIA_075470	Mitochondrial ribosomal protein L11, putative; Belongs to the universal ribosomal protein uL11 family. (153 aa)
	NFIA_075540	Mitochondrial ribosomal protein L23, putative. (204 aa)
	NFIA_077830	Mitochondrial ribosomal protein, putative. (194 aa)
	NFIA_084140	50S ribosomal protein L14; Belongs to the universal ribosomal protein uL14 family. (131 aa)

Your Current Organism:

Aspergillus fischeri

NCBI taxonomy Id: 331117
Other names: A. fischeri NRRL 181, Aspergillus fischeri NRRL 181, Neosartorya fischeri NRRL 181

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NFIA_003210	NFIA_012830	A1DJS8	A1D2F1	Uncharacterized protein.	60S ribosomal protein L3.	0.882
NFIA_003210	NFIA_013590	A1DJS8	A1D2M7	Uncharacterized protein.	50S ribosomal subunit protein L15.	0.913
NFIA_003210	NFIA_016200	A1DJS8	A1D3D4	Uncharacterized protein.	50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.	0.923
NFIA_003210	NFIA_016800	A1DJS8	A1D3J1	Uncharacterized protein.	Ribosomal protein L32, putative.	0.888
NFIA_003210	NFIA_020530	A1DJS8	A1D4K2	Uncharacterized protein.	50S ribosomal protein YmL27.	0.920
NFIA_003210	NFIA_034180	A1DJS8	A1CYN2	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.899
NFIA_003210	NFIA_036700	A1DJS8	A1CZC8	Uncharacterized protein.	50S ribosomal subunit L7, putative.	0.757
NFIA_003210	NFIA_038080	A1DJS8	A1CZR4	Uncharacterized protein.	50S ribosomal protein L27, putative.	0.862
NFIA_003210	NFIA_038420	A1DJS8	A1CZU8	Uncharacterized protein.	Uncharacterized protein.	0.800
NFIA_003210	NFIA_054720	A1DJS8	A1DMV5	Uncharacterized protein.	60S ribosomal protein L6, putative; Belongs to the universal ribosomal protein uL6 family.	0.839
NFIA_003210	NFIA_054970	A1DJS8	A1DMX8	Uncharacterized protein.	Ribosomal protein L33, putative.	0.826
NFIA_003210	NFIA_058580	A1DJS8	A1DNY6	Uncharacterized protein.	50S ribosomal protein Mrp49.	0.876
NFIA_003210	NFIA_065930	A1DJS8	A1D6T5	Uncharacterized protein.	Mitochondrial large ribosomal subunit L49, putative.	0.876
NFIA_003210	NFIA_066940	A1DJS8	A1D733	Uncharacterized protein.	Uncharacterized protein.	0.883
NFIA_003210	NFIA_067540	A1DJS8	A1D793	Uncharacterized protein.	Peptidyl-tRNA hydrolase domain protein.	0.762
NFIA_003210	NFIA_068750	A1DJS8	A1D7L1	Uncharacterized protein.	Uncharacterized protein.	0.467
NFIA_003210	NFIA_069060	A1DJS8	A1D7P1	Uncharacterized protein.	Aconitate hydratase, putative.	0.764
NFIA_003210	NFIA_069250	A1DJS8	A1D7R0	Uncharacterized protein.	Uncharacterized protein.	0.916
NFIA_003210	NFIA_071730	A1DJS8	A1D8F8	Uncharacterized protein.	60S ribosomal protein L20, putative.	0.686
NFIA_003210	NFIA_073570	A1DJS8	A1DDI4	Uncharacterized protein.	Mitochondrial ribosomal protein L43, putative.	0.838