4 items (Aspergillus fischeri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NFIA_054620	Proteasome subunit alpha type. (255 aa)
	NFIA_039960	Proteasome subunit alpha type. (274 aa)
	NFIA_086680	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (252 aa)
	NFIA_051340	Proteasome subunit alpha type. (262 aa)

Your Current Organism:

Aspergillus fischeri

NCBI taxonomy Id: 331117
Other names: A. fischeri NRRL 181, Aspergillus fischeri NRRL 181, Neosartorya fischeri NRRL 181

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NFIA_039960	NFIA_051340	A1D0A0	A1DLW8	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
NFIA_039960	NFIA_054620	A1D0A0	A1DMU5	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
NFIA_039960	NFIA_086680	A1D0A0	A1DH56	Proteasome subunit alpha type.	Proteasome endopeptidase complex; Belongs to the peptidase T1A family.	0.999
NFIA_051340	NFIA_039960	A1DLW8	A1D0A0	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
NFIA_051340	NFIA_054620	A1DLW8	A1DMU5	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
NFIA_051340	NFIA_086680	A1DLW8	A1DH56	Proteasome subunit alpha type.	Proteasome endopeptidase complex; Belongs to the peptidase T1A family.	0.999
NFIA_054620	NFIA_039960	A1DMU5	A1D0A0	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
NFIA_054620	NFIA_051340	A1DMU5	A1DLW8	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
NFIA_054620	NFIA_086680	A1DMU5	A1DH56	Proteasome subunit alpha type.	Proteasome endopeptidase complex; Belongs to the peptidase T1A family.	0.999
NFIA_086680	NFIA_039960	A1DH56	A1D0A0	Proteasome endopeptidase complex; Belongs to the peptidase T1A family.	Proteasome subunit alpha type.	0.999
NFIA_086680	NFIA_051340	A1DH56	A1DLW8	Proteasome endopeptidase complex; Belongs to the peptidase T1A family.	Proteasome subunit alpha type.	0.999
NFIA_086680	NFIA_054620	A1DH56	A1DMU5	Proteasome endopeptidase complex; Belongs to the peptidase T1A family.	Proteasome subunit alpha type.	0.999