STRINGSTRING
SFA44319.1 SFA44319.1 SFA44325.1 SFA44325.1 SFA59235.1 SFA59235.1 SFA59238.1 SFA59238.1 SFA59242.1 SFA59242.1 SFA59247.1 SFA59247.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SFA44319.1Uncharacterised protein family (UPF0158). (71 aa)
SFA44325.1Pimeloyl-ACP methyl ester carboxylesterase. (275 aa)
SFA59235.1Methyltransferase domain-containing protein. (243 aa)
SFA59238.1Undecaprenyl-diphosphatase. (187 aa)
SFA59242.1Zinc transporter ZupT. (238 aa)
SFA59247.1Endonuclease, Uma2 family (restriction endonuclease fold). (199 aa)
Your Current Organism:
Pedobacter suwonensis
NCBI taxonomy Id: 332999
Other names: DSM 18130, KACC 11317, P. suwonensis, Pedobacter suwonensis Kwon et al. 2007, strain 15-52
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