STRINGSTRING
alaS alaS SFA41229.1 SFA41229.1 SFA42760.1 SFA42760.1 SFA46016.1 SFA46016.1 SFA47054.1 SFA47054.1 SFA47058.1 SFA47058.1 SFA50861.1 SFA50861.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
alaSalanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. (890 aa)
SFA41229.1Hypothetical protein. (432 aa)
SFA42760.1Tetratricopeptide repeat-containing protein. (467 aa)
SFA46016.1Ankyrin repeat. (219 aa)
SFA47054.1Ankyrin repeat. (448 aa)
SFA47058.1Ankyrin repeat-containing protein. (400 aa)
SFA50861.1Hypothetical protein. (238 aa)
Your Current Organism:
Pedobacter suwonensis
NCBI taxonomy Id: 332999
Other names: DSM 18130, KACC 11317, P. suwonensis, Pedobacter suwonensis Kwon et al. 2007, strain 15-52
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