(60 nodes) Histidine kinase domain network (Pedobacter suwonensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SFA58361.1	Hypothetical protein. (261 aa)
	SFA58125.1	Two component regulator propeller. (1375 aa)
	SFA56777.1	Signal transduction histidine kinase. (681 aa)
	SFA56036.1	Signal transduction histidine kinase. (436 aa)
	SFA60188.1	Signal transduction histidine kinase. (417 aa)
	SFA60632.1	PAS domain S-box-containing protein. (1462 aa)
	SFA60642.1	PAS domain S-box-containing protein. (762 aa)
	SFA59466.1	PAS domain S-box-containing protein. (617 aa)
	SFA55415.1	Signal transduction histidine kinase. (531 aa)
	SFA54314.1	GAF sensor signal transduction histidine kinase. (405 aa)
	SFA54268.1	PAS domain-containing protein. (421 aa)
	SFA54215.1	Signal transduction histidine kinase. (1365 aa)
	SFA54180.1	PAS domain S-box-containing protein. (361 aa)
	SFA53576.1	Hypothetical protein. (622 aa)
	SFA53298.1	GAF domain-containing protein. (402 aa)
	SFA52668.1	Signal transduction histidine kinase. (451 aa)
	SFA52628.1	PAS fold-containing protein. (680 aa)
	SFA52610.1	Signal transduction histidine kinase. (975 aa)
	SFA52606.1	PAS domain S-box-containing protein. (495 aa)
	SFA52498.1	PAS/PAC sensor signal transduction histidine kinase. (583 aa)
	SFA51882.1	Histidine kinase. (263 aa)
	SFA51683.1	His Kinase A (phospho-acceptor) domain-containing protein. (475 aa)
	SFA50508.1	PAS fold-containing protein. (358 aa)
	SFA49427.1	Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR. (341 aa)
	SFA49390.1	Signal transduction histidine kinase. (1194 aa)
	SFA49386.1	His Kinase A (phospho-acceptor) domain-containing protein. (377 aa)
	SFA49376.1	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (402 aa)
	SFA49744.1	PAS domain S-box-containing protein. (831 aa)
	SFA49548.1	HAMP domain-containing protein. (1243 aa)
	SFA49528.1	Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR. (606 aa)
	SFA48076.1	Hpt domain-containing protein. (825 aa)
	SFA48636.1	Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR. (557 aa)
	SFA48508.1	Signal transduction histidine kinase. (778 aa)
	SFA46919.1	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (407 aa)
	SFA46649.1	Two component regulator propeller. (1056 aa)
	SFA47600.1	Signal transduction histidine kinase. (450 aa)
	SFA46171.1	Signal transduction histidine kinase. (458 aa)
	SFA45816.1	PAS domain-containing protein. (451 aa)
	SFA39726.1	His Kinase A (phospho-acceptor) domain-containing protein. (368 aa)
	SFA39721.1	Multi-sensor signal transduction histidine kinase. (736 aa)
	SFA38823.1	PAS domain S-box-containing protein. (400 aa)
	SFA38767.1	His Kinase A (phospho-acceptor) domain-containing protein. (484 aa)
	SFA38739.1	Histidine kinase. (667 aa)
	SFA38314.1	PAS domain S-box-containing protein. (1133 aa)
	SFA38155.1	Signal transduction histidine kinase. (366 aa)
	SFA38116.1	Bacteriophytochrome (light-regulated signal transduction histidine kinase). (737 aa)
	SFA45639.1	PAS domain S-box-containing protein. (654 aa)
	SFA45629.1	Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR. (474 aa)
	SFA44354.1	His Kinase A (phospho-acceptor) domain-containing protein. (288 aa)
	SFA44624.1	Signal transduction histidine kinase. (1391 aa)
	SFA44575.1	Signal transduction histidine kinase. (1345 aa)
	SFA44481.1	Signal transduction histidine kinase. (1341 aa)
	SFA43514.1	Signal transduction histidine kinase. (624 aa)
	SFA40391.1	PAS domain S-box-containing protein. (865 aa)
	SFA40317.1	PAS fold-containing protein. (381 aa)
	SFA41560.1	PAS domain S-box-containing protein. (664 aa)
	SFA41440.1	PAS domain S-box-containing protein. (667 aa)
	SFA40977.1	Signal transduction histidine kinase. (1389 aa)
	SFA40949.1	PAS domain S-box-containing protein. (824 aa)
	SFA59407.1	Signal transduction histidine kinase. (1347 aa)

Your Current Organism:

Pedobacter suwonensis

NCBI taxonomy Id: 332999
Other names: DSM 18130, KACC 11317, P. suwonensis, Pedobacter suwonensis Kwon et al. 2007, strain 15-52

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SFA38116.1	SFA38155.1	SAMN04488511_101121	SAMN04488511_101131	Bacteriophytochrome (light-regulated signal transduction histidine kinase).	Signal transduction histidine kinase.	0.633
SFA38116.1	SFA38314.1	SAMN04488511_101121	SAMN04488511_101173	Bacteriophytochrome (light-regulated signal transduction histidine kinase).	PAS domain S-box-containing protein.	0.934
SFA38116.1	SFA38823.1	SAMN04488511_101121	SAMN04488511_101295	Bacteriophytochrome (light-regulated signal transduction histidine kinase).	PAS domain S-box-containing protein.	0.430
SFA38116.1	SFA40391.1	SAMN04488511_101121	SAMN04488511_10259	Bacteriophytochrome (light-regulated signal transduction histidine kinase).	PAS domain S-box-containing protein.	0.626
SFA38116.1	SFA40949.1	SAMN04488511_101121	SAMN04488511_102205	Bacteriophytochrome (light-regulated signal transduction histidine kinase).	PAS domain S-box-containing protein.	0.723
SFA38116.1	SFA40977.1	SAMN04488511_101121	SAMN04488511_102211	Bacteriophytochrome (light-regulated signal transduction histidine kinase).	Signal transduction histidine kinase.	0.506
SFA38116.1	SFA44481.1	SAMN04488511_101121	SAMN04488511_104114	Bacteriophytochrome (light-regulated signal transduction histidine kinase).	Signal transduction histidine kinase.	0.502
SFA38116.1	SFA44575.1	SAMN04488511_101121	SAMN04488511_104138	Bacteriophytochrome (light-regulated signal transduction histidine kinase).	Signal transduction histidine kinase.	0.530
SFA38116.1	SFA44624.1	SAMN04488511_101121	SAMN04488511_104152	Bacteriophytochrome (light-regulated signal transduction histidine kinase).	Signal transduction histidine kinase.	0.502
SFA38116.1	SFA45629.1	SAMN04488511_101121	SAMN04488511_105115	Bacteriophytochrome (light-regulated signal transduction histidine kinase).	Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.	0.407
SFA38116.1	SFA45639.1	SAMN04488511_101121	SAMN04488511_105119	Bacteriophytochrome (light-regulated signal transduction histidine kinase).	PAS domain S-box-containing protein.	0.923
SFA38116.1	SFA46919.1	SAMN04488511_101121	SAMN04488511_10697	Bacteriophytochrome (light-regulated signal transduction histidine kinase).	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	0.630
SFA38116.1	SFA48076.1	SAMN04488511_101121	SAMN04488511_1075	Bacteriophytochrome (light-regulated signal transduction histidine kinase).	Hpt domain-containing protein.	0.547
SFA38116.1	SFA48508.1	SAMN04488511_101121	SAMN04488511_107152	Bacteriophytochrome (light-regulated signal transduction histidine kinase).	Signal transduction histidine kinase.	0.883
SFA38116.1	SFA49386.1	SAMN04488511_101121	SAMN04488511_10871	Bacteriophytochrome (light-regulated signal transduction histidine kinase).	His Kinase A (phospho-acceptor) domain-containing protein.	0.486
SFA38116.1	SFA49390.1	SAMN04488511_101121	SAMN04488511_10872	Bacteriophytochrome (light-regulated signal transduction histidine kinase).	Signal transduction histidine kinase.	0.960
SFA38116.1	SFA49744.1	SAMN04488511_101121	SAMN04488511_108198	Bacteriophytochrome (light-regulated signal transduction histidine kinase).	PAS domain S-box-containing protein.	0.807
SFA38116.1	SFA52606.1	SAMN04488511_101121	SAMN04488511_11181	Bacteriophytochrome (light-regulated signal transduction histidine kinase).	PAS domain S-box-containing protein.	0.456
SFA38116.1	SFA52610.1	SAMN04488511_101121	SAMN04488511_11182	Bacteriophytochrome (light-regulated signal transduction histidine kinase).	Signal transduction histidine kinase.	0.405
SFA38116.1	SFA53298.1	SAMN04488511_101121	SAMN04488511_11221	Bacteriophytochrome (light-regulated signal transduction histidine kinase).	GAF domain-containing protein.	0.630