(5 nodes) Putative restriction endonuclease network (Pedobacter suwonensis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SFA53522.1	Endonuclease, Uma2 family (restriction endonuclease fold). (211 aa)
	SFA53524.1	Endonuclease, Uma2 family (restriction endonuclease fold). (212 aa)
	SFA59247.1	Endonuclease, Uma2 family (restriction endonuclease fold). (199 aa)
	SFA59762.1	Endonuclease, Uma2 family (restriction endonuclease fold). (209 aa)
	SFA59764.1	Endonuclease, Uma2 family (restriction endonuclease fold). (209 aa)

Your Current Organism:

Pedobacter suwonensis

NCBI taxonomy Id: 332999
Other names: DSM 18130, KACC 11317, P. suwonensis, Pedobacter suwonensis Kwon et al. 2007, strain 15-52

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SFA53522.1	SFA53524.1	SAMN04488511_11277	SAMN04488511_11278	Endonuclease, Uma2 family (restriction endonuclease fold).	Endonuclease, Uma2 family (restriction endonuclease fold).	0.652
SFA53524.1	SFA53522.1	SAMN04488511_11278	SAMN04488511_11277	Endonuclease, Uma2 family (restriction endonuclease fold).	Endonuclease, Uma2 family (restriction endonuclease fold).	0.652
SFA59247.1	SFA59762.1	SAMN04488511_12159	SAMN04488511_12346	Endonuclease, Uma2 family (restriction endonuclease fold).	Endonuclease, Uma2 family (restriction endonuclease fold).	0.762
SFA59762.1	SFA59247.1	SAMN04488511_12346	SAMN04488511_12159	Endonuclease, Uma2 family (restriction endonuclease fold).	Endonuclease, Uma2 family (restriction endonuclease fold).	0.762
SFA59762.1	SFA59764.1	SAMN04488511_12346	SAMN04488511_12347	Endonuclease, Uma2 family (restriction endonuclease fold).	Endonuclease, Uma2 family (restriction endonuclease fold).	0.775
SFA59764.1	SFA59762.1	SAMN04488511_12347	SAMN04488511_12346	Endonuclease, Uma2 family (restriction endonuclease fold).	Endonuclease, Uma2 family (restriction endonuclease fold).	0.775