(55 nodes) Mixed, incl. CD28 dependent Vav1 pathway, and betaPIX coiled coil network (Hirundo rustica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DUI87_34683	Protein kinase domain-containing protein. (680 aa)
	DUI87_34703	Protein kinase domain-containing protein. (665 aa)
	DUI87_34434	Uncharacterized protein. (848 aa)
	DUI87_35201	Uncharacterized protein. (735 aa)
	DUI87_34513	Protein kinase domain-containing protein. (825 aa)
	DUI87_34678	Protein kinase domain-containing protein. (566 aa)
	DUI87_33481	Protein kinase domain-containing protein. (282 aa)
	DUI87_34471	Protein kinase domain-containing protein. (650 aa)
	DUI87_34568	Protein kinase domain-containing protein. (512 aa)
	DUI87_33558	Uncharacterized protein. (941 aa)
	DUI87_34422	Protein kinase domain-containing protein. (680 aa)
	DUI87_33482	CRIB domain-containing protein. (277 aa)
	DUI87_34511	Protein kinase domain-containing protein. (826 aa)
	DUI87_34685	Protein kinase domain-containing protein. (665 aa)
	DUI87_34161	Uncharacterized protein. (801 aa)
	DUI87_32242	Protein kinase domain-containing protein. (711 aa)
	DUI87_31107	Protein kinase domain-containing protein. (704 aa)
	DUI87_31112	Protein kinase domain-containing protein. (263 aa)
	DUI87_34575	Protein kinase domain-containing protein. (681 aa)
	DUI87_34109	Uncharacterized protein. (856 aa)
	DUI87_25698	Uncharacterized protein. (698 aa)
	DUI87_25115	Rho-GAP domain-containing protein. (458 aa)
	DUI87_31666	Protein kinase domain-containing protein. (741 aa)
	DUI87_23481	FAM212 domain-containing protein. (302 aa)
	DUI87_22635	Uncharacterized protein. (1103 aa)
	DUI87_28163	Uncharacterized protein. (228 aa)
	DUI87_22275	Protein kinase domain-containing protein. (1046 aa)
	DUI87_22071	Uncharacterized protein. (811 aa)
	DUI87_21441	Non-specific serine/threonine protein kinase. (508 aa)
	DUI87_18346	Uncharacterized protein. (381 aa)
	DUI87_18345	SH2 domain-containing protein. (252 aa)
	DUI87_16060	Cytoplasmic protein. (380 aa)
	DUI87_16390	Uncharacterized protein. (270 aa)
	DUI87_16400	Uncharacterized protein. (244 aa)
	DUI87_16983	Non-specific serine/threonine protein kinase. (464 aa)
	DUI87_15202	Uncharacterized protein. (346 aa)
	DUI87_14717	Uncharacterized protein. (1363 aa)
	DUI87_14064	Protein kinase domain-containing protein. (827 aa)
	DUI87_15391	Non-specific serine/threonine protein kinase. (879 aa)
	DUI87_13014	Uncharacterized protein. (174 aa)
	DUI87_14770	Rho-GAP domain-containing protein. (966 aa)
	DUI87_12419	Uncharacterized protein. (752 aa)
	DUI87_12185	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (460 aa)
	DUI87_15994	Uncharacterized protein. (795 aa)
	DUI87_10746	Uncharacterized protein. (112 aa)
	DUI87_10743	Uncharacterized protein. (228 aa)
	DUI87_11599	Rho-GAP domain-containing protein. (483 aa)
	DUI87_09248	Uncharacterized protein. (120 aa)
	DUI87_08282	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (478 aa)
	DUI87_04629	Uncharacterized protein. (1959 aa)
	DUI87_04737	Rho-GAP domain-containing protein. (214 aa)
	DUI87_00875	Uncharacterized protein. (523 aa)
	DUI87_04736	Uncharacterized protein. (186 aa)
	DUI87_00560	Uncharacterized protein. (1059 aa)
	DUI87_00791	Protein kinase domain-containing protein. (847 aa)

Your Current Organism:

Hirundo rustica

NCBI taxonomy Id: 333673
Other names: H. rustica rustica, Hirundo rustica rustica

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DUI87_00560	DUI87_00875	A0A3M0L9S2	A0A3M0L3B5	Uncharacterized protein.	Uncharacterized protein.	0.824
DUI87_00560	DUI87_04629	A0A3M0L9S2	A0A3M0L010	Uncharacterized protein.	Uncharacterized protein.	0.685
DUI87_00560	DUI87_08282	A0A3M0L9S2	A0A3M0KSD8	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.677
DUI87_00560	DUI87_11599	A0A3M0L9S2	A0A3M0KKL3	Uncharacterized protein.	Rho-GAP domain-containing protein.	0.455
DUI87_00560	DUI87_12185	A0A3M0L9S2	A0A3M0KCQ5	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.602
DUI87_00560	DUI87_12419	A0A3M0L9S2	A0A3M0KBZ5	Uncharacterized protein.	Uncharacterized protein.	0.563
DUI87_00560	DUI87_13014	A0A3M0L9S2	A0A3M0KAI1	Uncharacterized protein.	Uncharacterized protein.	0.404
DUI87_00560	DUI87_14064	A0A3M0L9S2	A0A3M0K7D8	Uncharacterized protein.	Protein kinase domain-containing protein.	0.705
DUI87_00560	DUI87_14717	A0A3M0L9S2	A0A3M0K5K7	Uncharacterized protein.	Uncharacterized protein.	0.455
DUI87_00560	DUI87_15391	A0A3M0L9S2	A0A3M0KA28	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.475
DUI87_00560	DUI87_15994	A0A3M0L9S2	A0A3M0KHC1	Uncharacterized protein.	Uncharacterized protein.	0.848
DUI87_00560	DUI87_16060	A0A3M0L9S2	A0A3M0K076	Uncharacterized protein.	Cytoplasmic protein.	0.920
DUI87_00560	DUI87_16983	A0A3M0L9S2	A0A3M0K2G4	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.632
DUI87_00560	DUI87_18345	A0A3M0L9S2	A0A3M0JYB1	Uncharacterized protein.	SH2 domain-containing protein.	0.455
DUI87_00560	DUI87_18346	A0A3M0L9S2	A0A3M0JVU7	Uncharacterized protein.	Uncharacterized protein.	0.455
DUI87_00560	DUI87_21441	A0A3M0L9S2	A0A3M0JT32	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.623
DUI87_00560	DUI87_22635	A0A3M0L9S2	A0A3M0JII1	Uncharacterized protein.	Uncharacterized protein.	0.455
DUI87_00560	DUI87_23481	A0A3M0L9S2	A0A3M0JIC3	Uncharacterized protein.	FAM212 domain-containing protein.	0.740
DUI87_00560	DUI87_25698	A0A3M0L9S2	A0A3M0J9I2	Uncharacterized protein.	Uncharacterized protein.	0.824
DUI87_00560	DUI87_28163	A0A3M0L9S2	A0A3M0JK39	Uncharacterized protein.	Uncharacterized protein.	0.807