19 items (Hirundo rustica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DUI87_26780	Protein kinase domain-containing protein. (520 aa)
	DUI87_24020	Uncharacterized protein. (84 aa)
	DUI87_24021	Protein kinase domain-containing protein. (307 aa)
	DUI87_23471	Protein kinase domain-containing protein. (753 aa)
	DUI87_14886	Protein kinase domain-containing protein. (380 aa)
	DUI87_32103	Protein kinase domain-containing protein. (537 aa)
	DUI87_30759	Protein kinase domain-containing protein. (224 aa)
	DUI87_22507	Protein kinase domain-containing protein. (695 aa)
	DUI87_05377	Alpha-type protein kinase domain-containing protein. (1086 aa)
	DUI87_08641	Protein kinase domain-containing protein. (79 aa)
	DUI87_08642	Protein kinase domain-containing protein. (478 aa)
	DUI87_11766	Protein kinase domain-containing protein. (544 aa)
	DUI87_12496	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (388 aa)
	DUI87_12561	Protein kinase domain-containing protein. (549 aa)
	DUI87_22646	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (213 aa)
	DUI87_17305	Uncharacterized protein. (70 aa)
	DUI87_17345	Protein kinase domain-containing protein. (402 aa)
	DUI87_17306	Protein kinase domain-containing protein. (660 aa)
	DUI87_13268	Protein kinase domain-containing protein. (405 aa)

Your Current Organism:

Hirundo rustica

NCBI taxonomy Id: 333673
Other names: H. rustica rustica, Hirundo rustica rustica

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DUI87_08641	DUI87_11766	A0A3M0KKH2	A0A3M0KK97	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.742
DUI87_08641	DUI87_13268	A0A3M0KKH2	A0A3M0KB84	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.726
DUI87_08641	DUI87_22646	A0A3M0KKH2	A0A3M0JJG6	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.720
DUI87_08641	DUI87_23471	A0A3M0KKH2	A0A3M0JIB2	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.726
DUI87_08641	DUI87_26780	A0A3M0KKH2	A0A3M0J756	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.632
DUI87_08641	DUI87_30759	A0A3M0KKH2	A0A3M0IW17	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.720
DUI87_08641	DUI87_32103	A0A3M0KKH2	A0A3M0IRR4	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.632
DUI87_08642	DUI87_11766	A0A3M0KKH0	A0A3M0KK97	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.745
DUI87_08642	DUI87_13268	A0A3M0KKH0	A0A3M0KB84	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.736
DUI87_08642	DUI87_22646	A0A3M0KKH0	A0A3M0JJG6	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.725
DUI87_08642	DUI87_23471	A0A3M0KKH0	A0A3M0JIB2	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.726
DUI87_08642	DUI87_26780	A0A3M0KKH0	A0A3M0J756	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.636
DUI87_08642	DUI87_30759	A0A3M0KKH0	A0A3M0IW17	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.720
DUI87_08642	DUI87_32103	A0A3M0KKH0	A0A3M0IRR4	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.635
DUI87_11766	DUI87_08641	A0A3M0KK97	A0A3M0KKH2	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.742
DUI87_11766	DUI87_08642	A0A3M0KK97	A0A3M0KKH0	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.745
DUI87_11766	DUI87_12561	A0A3M0KK97	A0A3M0KCA9	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.580
DUI87_11766	DUI87_13268	A0A3M0KK97	A0A3M0KB84	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.542
DUI87_11766	DUI87_17305	A0A3M0KK97	A0A3M0JXI7	Protein kinase domain-containing protein.	Uncharacterized protein.	0.580
DUI87_11766	DUI87_17306	A0A3M0KK97	A0A3M0JXU0	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.580