59 items (Hirundo rustica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DUI87_00144	Uncharacterized protein. (213 aa)
	DUI87_04098	F-BAR domain-containing protein. (2727 aa)
	DUI87_04640	PX domain-containing protein. (542 aa)
	DUI87_09830	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (535 aa)
	DUI87_05534	EF-hand domain-containing protein. (189 aa)
	DUI87_05393	Uncharacterized protein. (1388 aa)
	DUI87_31376	Uncharacterized protein. (536 aa)
	DUI87_31377	GAE domain-containing protein. (151 aa)
	DUI87_30039	Uncharacterized protein. (292 aa)
	DUI87_29996	UDENN domain-containing protein. (1134 aa)
	DUI87_30016	Uncharacterized protein. (261 aa)
	DUI87_29829	Uncharacterized protein. (1706 aa)
	DUI87_29498	Uncharacterized protein. (446 aa)
	DUI87_29041	Uncharacterized protein. (216 aa)
	DUI87_28318	FIP-RBD domain-containing protein. (471 aa)
	DUI87_28781	Uncharacterized protein. (242 aa)
	DUI87_28181	Uncharacterized protein. (813 aa)
	DUI87_33573	Uncharacterized protein. (561 aa)
	DUI87_33584	Uncharacterized protein. (452 aa)
	DUI87_28562	Uncharacterized protein. (216 aa)
	DUI87_28320	EF-hand domain-containing protein. (100 aa)
	DUI87_25426	Uncharacterized protein. (162 aa)
	DUI87_24719	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (175 aa)
	DUI87_25488	Uncharacterized protein. (211 aa)
	DUI87_25245	PX domain-containing protein. (162 aa)
	DUI87_24448	Uncharacterized protein. (1057 aa)
	DUI87_30338	Uncharacterized protein. (326 aa)
	DUI87_29703	Uncharacterized protein. (1249 aa)
	DUI87_29672	Uncharacterized protein. (486 aa)
	DUI87_25427	Uncharacterized protein. (663 aa)
	DUI87_23146	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (541 aa)
	DUI87_23139	CNH domain-containing protein. (846 aa)
	DUI87_22457	Uncharacterized protein. (218 aa)
	DUI87_22680	Uncharacterized protein. (246 aa)
	DUI87_23561	Uncharacterized protein. (207 aa)
	DUI87_19851	WH2 domain-containing protein. (556 aa)
	DUI87_21277	Uncharacterized protein. (685 aa)
	DUI87_18176	Uncharacterized protein. (967 aa)
	DUI87_18426	Uncharacterized protein. (168 aa)
	DUI87_20333	Uncharacterized protein. (428 aa)
	DUI87_15561	Uncharacterized protein. (513 aa)
	DUI87_17501	Uncharacterized protein. (201 aa)
	DUI87_14484	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (181 aa)
	DUI87_14643	UDENN domain-containing protein. (632 aa)
	DUI87_14700	PX domain-containing protein. (495 aa)
	DUI87_14061	Uncharacterized protein. (848 aa)
	DUI87_20320	Uncharacterized protein. (927 aa)
	DUI87_14485	Syntaxin-6_N domain-containing protein. (86 aa)
	DUI87_12781	Uncharacterized protein. (1080 aa)
	DUI87_14034	Uncharacterized protein. (733 aa)
	DUI87_12372	Vps53_N domain-containing protein. (931 aa)
	DUI87_05333	Uncharacterized protein. (747 aa)
	DUI87_06034	Uncharacterized protein. (767 aa)
	DUI87_13008	Uncharacterized protein. (351 aa)
	DUI87_08557	ANK_REP_REGION domain-containing protein. (1155 aa)
	DUI87_09437	Uncharacterized protein. (234 aa)
	DUI87_10672	PX domain-containing protein. (162 aa)
	DUI87_17330	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. (182 aa)
	DUI87_05905	WD_REPEATS_REGION domain-containing protein. (287 aa)

Your Current Organism:

Hirundo rustica

NCBI taxonomy Id: 333673
Other names: H. rustica rustica, Hirundo rustica rustica

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DUI87_00144	DUI87_12781	A0A3M0LC45	A0A3M0KBX7	Uncharacterized protein.	Uncharacterized protein.	0.685
DUI87_00144	DUI87_22680	A0A3M0LC45	A0A3M0JJ96	Uncharacterized protein.	Uncharacterized protein.	0.815
DUI87_00144	DUI87_23139	A0A3M0LC45	A0A3M0JIK1	Uncharacterized protein.	CNH domain-containing protein.	0.860
DUI87_00144	DUI87_23561	A0A3M0LC45	A0A3M0JN59	Uncharacterized protein.	Uncharacterized protein.	0.938
DUI87_00144	DUI87_24448	A0A3M0LC45	A0A3M0JDL7	Uncharacterized protein.	Uncharacterized protein.	0.537
DUI87_00144	DUI87_25488	A0A3M0LC45	A0A3M0JCK4	Uncharacterized protein.	Uncharacterized protein.	0.815
DUI87_04098	DUI87_23139	A0A3M0L341	A0A3M0JIK1	F-BAR domain-containing protein.	CNH domain-containing protein.	0.439
DUI87_04640	DUI87_10672	A0A3M0L4E0	A0A3M0KKH1	PX domain-containing protein.	PX domain-containing protein.	0.534
DUI87_04640	DUI87_14034	A0A3M0L4E0	A0A3M0KD50	PX domain-containing protein.	Uncharacterized protein.	0.404
DUI87_04640	DUI87_14061	A0A3M0L4E0	A0A3M0K783	PX domain-containing protein.	Uncharacterized protein.	0.936
DUI87_04640	DUI87_14700	A0A3M0L4E0	A0A3M0K5K5	PX domain-containing protein.	PX domain-containing protein.	0.994
DUI87_04640	DUI87_17330	A0A3M0L4E0	A0A3M0KF96	PX domain-containing protein.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.924
DUI87_04640	DUI87_22457	A0A3M0L4E0	A0A3M0JIP0	PX domain-containing protein.	Uncharacterized protein.	0.416
DUI87_04640	DUI87_25245	A0A3M0L4E0	A0A3M0JDF4	PX domain-containing protein.	PX domain-containing protein.	0.534
DUI87_04640	DUI87_28181	A0A3M0L4E0	A0A3M0J2T0	PX domain-containing protein.	Uncharacterized protein.	0.407
DUI87_04640	DUI87_28562	A0A3M0L4E0	A0A3M0J8A8	PX domain-containing protein.	Uncharacterized protein.	0.416
DUI87_04640	DUI87_29041	A0A3M0L4E0	A0A3M0J070	PX domain-containing protein.	Uncharacterized protein.	0.416
DUI87_04640	DUI87_29672	A0A3M0L4E0	A0A3M0JGS7	PX domain-containing protein.	Uncharacterized protein.	0.424
DUI87_04640	DUI87_30338	A0A3M0L4E0	A0A3M0JER8	PX domain-containing protein.	Uncharacterized protein.	0.909
DUI87_05333	DUI87_09830	A0A3M0KWI1	A0A3M0KYW4	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.891