7 items (Hirundo rustica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DUI87_11492	Uncharacterized protein. (255 aa)
	DUI87_11491	Uncharacterized protein. (722 aa)
	DUI87_34899	Uncharacterized protein. (1128 aa)
	DUI87_22127	FIP-RBD domain-containing protein. (1518 aa)
	DUI87_22128	C2 domain-containing protein. (268 aa)
	DUI87_21012	Selenoprotein T; Belongs to the SelWTH family. Selenoprotein T subfamily. (198 aa)
	DUI87_11458	Uncharacterized protein. (509 aa)

Your Current Organism:

Hirundo rustica

NCBI taxonomy Id: 333673
Other names: H. rustica rustica, Hirundo rustica rustica

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DUI87_11458	DUI87_22127	A0A3M0KDQ8	A0A3M0JJM4	Uncharacterized protein.	FIP-RBD domain-containing protein.	0.934
DUI87_11458	DUI87_22128	A0A3M0KDQ8	A0A3M0JKH8	Uncharacterized protein.	C2 domain-containing protein.	0.934
DUI87_11458	DUI87_34899	A0A3M0KDQ8	A0A3M0IP76	Uncharacterized protein.	Uncharacterized protein.	0.934
DUI87_11491	DUI87_11492	A0A3M0KE07	A0A3M0KDQ6	Uncharacterized protein.	Uncharacterized protein.	0.899
DUI87_11492	DUI87_11491	A0A3M0KDQ6	A0A3M0KE07	Uncharacterized protein.	Uncharacterized protein.	0.899
DUI87_22127	DUI87_11458	A0A3M0JJM4	A0A3M0KDQ8	FIP-RBD domain-containing protein.	Uncharacterized protein.	0.934
DUI87_22128	DUI87_11458	A0A3M0JKH8	A0A3M0KDQ8	C2 domain-containing protein.	Uncharacterized protein.	0.934
DUI87_34899	DUI87_11458	A0A3M0IP76	A0A3M0KDQ8	Uncharacterized protein.	Uncharacterized protein.	0.934