(42 nodes) Cell cycle G1/S phase transition network (Hirundo rustica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DUI87_31019	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (682 aa)
	DUI87_17643	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2479 aa)
	DUI87_18432	Uncharacterized protein. (310 aa)
	DUI87_24835	RING-type domain-containing protein. (371 aa)
	DUI87_24881	G_PROTEIN_RECEP_F1_2 domain-containing protein. (404 aa)
	DUI87_23991	Protein kinase domain-containing protein. (559 aa)
	DUI87_25615	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (292 aa)
	DUI87_27693	E2F_TDP domain-containing protein. (422 aa)
	DUI87_27532	Uncharacterized protein. (126 aa)
	DUI87_28408	Uncharacterized protein. (117 aa)
	DUI87_35357	Uncharacterized protein. (294 aa)
	DUI87_29984	Serine/threonine-protein phosphatase. (305 aa)
	DUI87_31532	Uncharacterized protein. (543 aa)
	DUI87_32309	Phosphatase and actin regulator. (997 aa)
	DUI87_16595	Uncharacterized protein. (903 aa)
	DUI87_33245	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (316 aa)
	DUI87_31349	Protein kinase domain-containing protein. (767 aa)
	DUI87_31469	Uncharacterized protein. (400 aa)
	DUI87_33040	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. (453 aa)
	DUI87_33165	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (271 aa)
	DUI87_07707	CtIP_N domain-containing protein. (876 aa)
	DUI87_07058	BHLH domain-containing protein. (417 aa)
	DUI87_07324	Uncharacterized protein; Belongs to the cyclin family. (364 aa)
	DUI87_08573	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (406 aa)
	DUI87_16755	Non-specific serine/threonine protein kinase. (1044 aa)
	KATNA1-2	Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. (1632 aa)
	DUI87_09805	Uncharacterized protein. (189 aa)
	DUI87_11118	Uncharacterized protein. (887 aa)
	DUI87_12701	Uncharacterized protein. (860 aa)
	DUI87_11454	Cullin domain-containing protein; Belongs to the cullin family. (399 aa)
	DUI87_18431	Uncharacterized protein. (651 aa)
	DUI87_14862	Uncharacterized protein. (658 aa)
	DUI87_14049	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (329 aa)
	DUI87_16790	LisH domain-containing protein. (587 aa)
	DUI87_16791	NPAT_C domain-containing protein. (816 aa)
	DUI87_05838	E2F_CC-MB domain-containing protein. (104 aa)
	DUI87_04547	USP domain-containing protein; Belongs to the peptidase C19 family. (909 aa)
	DUI87_04334	Protein kinase domain-containing protein. (336 aa)
	DUI87_05855	Uncharacterized protein. (531 aa)
	DUI87_05837	E2F_TDP domain-containing protein. (172 aa)
	DUI87_08425	E2F_TDP domain-containing protein. (338 aa)
	DUI87_08262	BH4_2 domain-containing protein. (212 aa)

Your Current Organism:

Hirundo rustica

NCBI taxonomy Id: 333673
Other names: H. rustica rustica, Hirundo rustica rustica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DUI87_04334	DUI87_05837	A0A3M0L072	A0A3M0KVD9	Protein kinase domain-containing protein.	E2F_TDP domain-containing protein.	0.699
DUI87_04334	DUI87_05838	A0A3M0L072	A0A3M0L2S3	Protein kinase domain-containing protein.	E2F_CC-MB domain-containing protein.	0.699
DUI87_04334	DUI87_07324	A0A3M0L072	A0A3M0KPH6	Protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the cyclin family.	0.942
DUI87_04334	DUI87_07707	A0A3M0L072	A0A3M0KQY3	Protein kinase domain-containing protein.	CtIP_N domain-containing protein.	0.569
DUI87_04334	DUI87_08262	A0A3M0L072	A0A3M0KSB3	Protein kinase domain-containing protein.	BH4_2 domain-containing protein.	0.428
DUI87_04334	DUI87_08425	A0A3M0L072	A0A3M0KU51	Protein kinase domain-containing protein.	E2F_TDP domain-containing protein.	0.737
DUI87_04334	DUI87_08573	A0A3M0L072	A0A3M0KJR4	Protein kinase domain-containing protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.966
DUI87_04334	DUI87_09805	A0A3M0L072	A0A3M0KGI2	Protein kinase domain-containing protein.	Uncharacterized protein.	0.879
DUI87_04334	DUI87_11454	A0A3M0L072	A0A3M0KEA6	Protein kinase domain-containing protein.	Cullin domain-containing protein; Belongs to the cullin family.	0.728
DUI87_04334	DUI87_14049	A0A3M0L072	A0A3M0K7G2	Protein kinase domain-containing protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.942
DUI87_04334	DUI87_16595	A0A3M0L072	A0A3M0K1F9	Protein kinase domain-containing protein.	Uncharacterized protein.	0.927
DUI87_04334	DUI87_17643	A0A3M0L072	A0A3M0JZC2	Protein kinase domain-containing protein.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.793
DUI87_04334	DUI87_23991	A0A3M0L072	A0A3M0JEJ8	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.795
DUI87_04334	DUI87_24835	A0A3M0L072	A0A3M0JIU8	Protein kinase domain-containing protein.	RING-type domain-containing protein.	0.681
DUI87_04334	DUI87_25615	A0A3M0L072	A0A3M0JAD5	Protein kinase domain-containing protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.935
DUI87_04334	DUI87_27693	A0A3M0L072	A0A3M0J9M0	Protein kinase domain-containing protein.	E2F_TDP domain-containing protein.	0.747
DUI87_04334	DUI87_29984	A0A3M0L072	A0A3M0IZ86	Protein kinase domain-containing protein.	Serine/threonine-protein phosphatase.	0.551
DUI87_04334	DUI87_31019	A0A3M0L072	A0A3M0IV72	Protein kinase domain-containing protein.	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.408
DUI87_04334	DUI87_32309	A0A3M0L072	A0A3M0IWL1	Protein kinase domain-containing protein.	Phosphatase and actin regulator.	0.446
DUI87_04334	DUI87_33040	A0A3M0L072	A0A3M0IQA5	Protein kinase domain-containing protein.	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily.	0.408