61 items (Hirundo rustica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DUI87_33045	Uncharacterized protein. (594 aa)
	DUI87_14484	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (181 aa)
	DUI87_14657	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (489 aa)
	DUI87_14485	Syntaxin-6_N domain-containing protein. (86 aa)
	DUI87_12474	Uncharacterized protein. (369 aa)
	DUI87_11804	Annexin. (499 aa)
	DUI87_11165	C2 domain-containing protein. (675 aa)
	DUI87_10329	Uncharacterized protein. (218 aa)
	DUI87_08270	SERPIN domain-containing protein; Belongs to the serpin family. (399 aa)
	DUI87_07774	Uncharacterized protein. (226 aa)
	DUI87_06056	Uncharacterized protein. (237 aa)
	DUI87_04550	Uncharacterized protein. (544 aa)
	DUI87_07359	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (257 aa)
	DUI87_00693	B30.2/SPRY domain-containing protein. (319 aa)
	DUI87_04376	Uncharacterized protein. (2122 aa)
	DUI87_03566	Protein kinase domain-containing protein. (650 aa)
	DUI87_22457	Uncharacterized protein. (218 aa)
	DUI87_22749	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (882 aa)
	DUI87_25132	Uncharacterized protein; Belongs to the synaptobrevin family. (220 aa)
	DUI87_29652	Uncharacterized protein. (426 aa)
	DUI87_25591	Uncharacterized protein. (535 aa)
	DUI87_23350	Uncharacterized protein. (705 aa)
	DUI87_24011	Uncharacterized protein. (200 aa)
	DUI87_27332	Uncharacterized protein. (198 aa)
	DUI87_25101	Rho-GAP domain-containing protein. (861 aa)
	DUI87_25212	Uncharacterized protein. (201 aa)
	DUI87_25485	Uncharacterized protein. (577 aa)
	DUI87_28562	Uncharacterized protein. (216 aa)
	DUI87_27979	Uncharacterized protein. (194 aa)
	DUI87_28335	Uncharacterized protein. (685 aa)
	DUI87_28489	t-SNARE coiled-coil homology domain-containing protein. (278 aa)
	DUI87_28862	Uncharacterized protein. (216 aa)
	DUI87_29041	Uncharacterized protein. (216 aa)
	DUI87_31959	Serine/threonine-protein kinase TOR. (1446 aa)
	DUI87_30016	Uncharacterized protein. (261 aa)
	DUI87_32412	Rho-GAP domain-containing protein. (842 aa)
	DUI87_31970	Uncharacterized protein. (209 aa)
	DUI87_16924	Uncharacterized protein. (249 aa)
	DUI87_31580	Uncharacterized protein. (332 aa)
	DUI87_31961	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (2011 aa)
	DUI87_32872	Uncharacterized protein. (751 aa)
	DUI87_32080	V-SNARE coiled-coil homology domain-containing protein. (111 aa)
	DUI87_34899	Uncharacterized protein. (1128 aa)
	DUI87_33098	Uncharacterized protein. (254 aa)
	DUI87_33967	Uncharacterized protein. (152 aa)
	DUI87_35441	Uncharacterized protein. (609 aa)
	DUI87_35611	Uncharacterized protein. (152 aa)
	DUI87_16794	Uncharacterized protein. (267 aa)
	DUI87_16013	Uncharacterized protein. (516 aa)
	DUI87_15890	Uncharacterized protein. (201 aa)
	DUI87_15986	Uncharacterized protein. (294 aa)
	DUI87_18448	Uncharacterized protein. (952 aa)
	DUI87_24782	Uncharacterized protein. (504 aa)
	DUI87_20236	PH domain-containing protein. (620 aa)
	DUI87_23561	Uncharacterized protein. (207 aa)
	DUI87_22942	WD_REPEATS_REGION domain-containing protein. (1364 aa)
	DUI87_22128	C2 domain-containing protein. (268 aa)
	DUI87_28243	CRIB domain-containing protein. (163 aa)
	DUI87_28412	Uncharacterized protein. (627 aa)
	DUI87_28488	Uncharacterized protein. (129 aa)
	DUI87_22127	FIP-RBD domain-containing protein. (1518 aa)

Your Current Organism:

Hirundo rustica

NCBI taxonomy Id: 333673
Other names: H. rustica rustica, Hirundo rustica rustica

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DUI87_00693	DUI87_03566	A0A3M0LA47	A0A3M0LIR2	B30.2/SPRY domain-containing protein.	Protein kinase domain-containing protein.	0.692
DUI87_00693	DUI87_18448	A0A3M0LA47	A0A3M0JW66	B30.2/SPRY domain-containing protein.	Uncharacterized protein.	0.632
DUI87_03566	DUI87_00693	A0A3M0LIR2	A0A3M0LA47	Protein kinase domain-containing protein.	B30.2/SPRY domain-containing protein.	0.692
DUI87_03566	DUI87_04376	A0A3M0LIR2	A0A3M0LHH9	Protein kinase domain-containing protein.	Uncharacterized protein.	0.482
DUI87_03566	DUI87_18448	A0A3M0LIR2	A0A3M0JW66	Protein kinase domain-containing protein.	Uncharacterized protein.	0.687
DUI87_03566	DUI87_22457	A0A3M0LIR2	A0A3M0JIP0	Protein kinase domain-containing protein.	Uncharacterized protein.	0.414
DUI87_03566	DUI87_23561	A0A3M0LIR2	A0A3M0JN59	Protein kinase domain-containing protein.	Uncharacterized protein.	0.670
DUI87_03566	DUI87_28562	A0A3M0LIR2	A0A3M0J8A8	Protein kinase domain-containing protein.	Uncharacterized protein.	0.414
DUI87_03566	DUI87_29041	A0A3M0LIR2	A0A3M0J070	Protein kinase domain-containing protein.	Uncharacterized protein.	0.414
DUI87_03566	DUI87_31959	A0A3M0LIR2	A0A3M0IYZ1	Protein kinase domain-containing protein.	Serine/threonine-protein kinase TOR.	0.517
DUI87_03566	DUI87_31961	A0A3M0LIR2	A0A3M0IQQ1	Protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.517
DUI87_03566	DUI87_31970	A0A3M0LIR2	A0A3M0IV24	Protein kinase domain-containing protein.	Uncharacterized protein.	0.723
DUI87_04376	DUI87_03566	A0A3M0LHH9	A0A3M0LIR2	Uncharacterized protein.	Protein kinase domain-containing protein.	0.482
DUI87_04376	DUI87_07359	A0A3M0LHH9	A0A3M0L7J1	Uncharacterized protein.	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	0.937
DUI87_04376	DUI87_22749	A0A3M0LHH9	A0A3M0JI04	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.973
DUI87_04376	DUI87_25101	A0A3M0LHH9	A0A3M0JBD5	Uncharacterized protein.	Rho-GAP domain-containing protein.	0.738
DUI87_04376	DUI87_28412	A0A3M0LHH9	A0A3M0JK02	Uncharacterized protein.	Uncharacterized protein.	0.482
DUI87_04376	DUI87_31959	A0A3M0LHH9	A0A3M0IYZ1	Uncharacterized protein.	Serine/threonine-protein kinase TOR.	0.704
DUI87_04376	DUI87_31961	A0A3M0LHH9	A0A3M0IQQ1	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.704
DUI87_04376	DUI87_32412	A0A3M0LHH9	A0A3M0IWV7	Uncharacterized protein.	Rho-GAP domain-containing protein.	0.718