(40 nodes) Midbody network (Hirundo rustica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DUI87_23066	Uncharacterized protein. (172 aa)
	DUI87_23394	Uncharacterized protein. (386 aa)
	DUI87_25351	Uncharacterized protein. (344 aa)
	DUI87_24178	Uncharacterized protein. (354 aa)
	DUI87_25338	Uncharacterized protein. (133 aa)
	DUI87_24719	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (175 aa)
	DUI87_33486	Deacetylase sirtuin-type domain-containing protein. (475 aa)
	IL16	Pro-interleukin-16; Interleukin-16 stimulates a migratory response in CD4+ lymphocytes, monocytes, and eosinophils. Primes CD4+ T-cells for IL-2 and IL-15 responsiveness. Also induces T-lymphocyte expression of interleukin 2 receptor. Ligand for CD4. (1283 aa)
	DUI87_28094	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1235 aa)
	DUI87_29513	Uncharacterized protein. (592 aa)
	DUI87_29874	Uncharacterized protein. (140 aa)
	DUI87_30987	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (375 aa)
	DUI87_16108	MIT_C domain-containing protein. (110 aa)
	DUI87_16107	MIT domain-containing protein. (137 aa)
	DUI87_16669	MIT domain-containing protein. (632 aa)
	DUI87_18580	BRO1 domain-containing protein. (873 aa)
	DUI87_13195	Uncharacterized protein. (357 aa)
	DUI87_11571	Uncharacterized protein. (348 aa)
	DUI87_11659	G_PROTEIN_RECEP_F1_2 domain-containing protein. (684 aa)
	DUI87_11804	Annexin. (499 aa)
	DUI87_11560	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (207 aa)
	DUI87_11570	Uncharacterized protein. (254 aa)
	DUI87_09821	Protein yippee-like; Belongs to the yippee family. (82 aa)
	DUI87_10118	MIT domain-containing protein; Belongs to the AAA ATPase family. (558 aa)
	DUI87_10113	Sacchrp_dh_NADP domain-containing protein. (459 aa)
	DUI87_09050	Uncharacterized protein. (732 aa)
	DUI87_09453	Amidohydro-rel domain-containing protein. (683 aa)
	DUI87_07978	Uncharacterized protein. (219 aa)
	DUI87_05152	Serine/threonine-protein kinase PLK. (725 aa)
	DUI87_09912	Uncharacterized protein. (2892 aa)
	DUI87_10151	UBIQUITIN_CONJUGAT_2 domain-containing protein. (4419 aa)
	DUI87_04301	Uncharacterized protein. (158 aa)
	DUI87_17405	TPR_REGION domain-containing protein. (2664 aa)
	DUI87_18025	Uncharacterized protein. (114 aa)
	DUI87_20318	ANK_REP_REGION domain-containing protein. (340 aa)
	DUI87_19850	Helicase ATP-binding domain-containing protein. (873 aa)
	DUI87_23064	FYVE-type domain-containing protein. (2223 aa)
	DUI87_22749	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (882 aa)
	DUI87_31970	Uncharacterized protein. (209 aa)
	DUI87_32290	CS domain-containing protein. (342 aa)

Your Current Organism:

Hirundo rustica

NCBI taxonomy Id: 333673
Other names: H. rustica rustica, Hirundo rustica rustica

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DUI87_04301	DUI87_05152	A0A3M0L3I9	A0A3M0KXR4	Uncharacterized protein.	Serine/threonine-protein kinase PLK.	0.949
DUI87_04301	DUI87_09912	A0A3M0L3I9	A0A3M0KZ32	Uncharacterized protein.	Uncharacterized protein.	0.820
DUI87_04301	DUI87_10151	A0A3M0L3I9	A0A3M0KZR5	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.807
DUI87_04301	DUI87_11659	A0A3M0L3I9	A0A3M0KE87	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.762
DUI87_04301	DUI87_28094	A0A3M0L3I9	A0A3M0J211	Uncharacterized protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.815
DUI87_04301	DUI87_29874	A0A3M0L3I9	A0A3M0IY30	Uncharacterized protein.	Uncharacterized protein.	0.907
DUI87_04301	DUI87_30987	A0A3M0L3I9	A0A3M0IW43	Uncharacterized protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.815
DUI87_04301	DUI87_32290	A0A3M0L3I9	A0A3M0IQS3	Uncharacterized protein.	CS domain-containing protein.	0.636
DUI87_05152	DUI87_04301	A0A3M0KXR4	A0A3M0L3I9	Serine/threonine-protein kinase PLK.	Uncharacterized protein.	0.949
DUI87_05152	DUI87_09912	A0A3M0KXR4	A0A3M0KZ32	Serine/threonine-protein kinase PLK.	Uncharacterized protein.	0.949
DUI87_05152	DUI87_10118	A0A3M0KXR4	A0A3M0KHS1	Serine/threonine-protein kinase PLK.	MIT domain-containing protein; Belongs to the AAA ATPase family.	0.446
DUI87_05152	DUI87_10151	A0A3M0KXR4	A0A3M0KZR5	Serine/threonine-protein kinase PLK.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.851
DUI87_05152	DUI87_11560	A0A3M0KXR4	A0A3M0KFS0	Serine/threonine-protein kinase PLK.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.512
DUI87_05152	DUI87_11659	A0A3M0KXR4	A0A3M0KE87	Serine/threonine-protein kinase PLK.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.634
DUI87_05152	DUI87_17405	A0A3M0KXR4	A0A3M0JXU9	Serine/threonine-protein kinase PLK.	TPR_REGION domain-containing protein.	0.567
DUI87_05152	DUI87_24719	A0A3M0KXR4	A0A3M0JC21	Serine/threonine-protein kinase PLK.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.512
DUI87_05152	DUI87_28094	A0A3M0KXR4	A0A3M0J211	Serine/threonine-protein kinase PLK.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.714
DUI87_05152	DUI87_29874	A0A3M0KXR4	A0A3M0IY30	Serine/threonine-protein kinase PLK.	Uncharacterized protein.	0.949
DUI87_05152	DUI87_30987	A0A3M0KXR4	A0A3M0IW43	Serine/threonine-protein kinase PLK.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.714
DUI87_05152	DUI87_31970	A0A3M0KXR4	A0A3M0IV24	Serine/threonine-protein kinase PLK.	Uncharacterized protein.	0.539