138 items (Hirundo rustica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DUI87_26871	Uncharacterized protein. (330 aa)
	DUI87_07114	PDZ domain-containing protein. (233 aa)
	DUI87_04359	Uncharacterized protein. (1530 aa)
	DUI87_05183	Uncharacterized protein. (350 aa)
	DUI87_00437	Uncharacterized protein. (435 aa)
	DUI87_00188	PDZ domain-containing protein. (648 aa)
	DUI87_05561	Uncharacterized protein. (1353 aa)
	DUI87_11759	PDZ domain-containing protein. (1108 aa)
	DUI87_05302	Uncharacterized protein. (1118 aa)
	DUI87_12620	Uncharacterized protein. (1480 aa)
	DUI87_07989	Uncharacterized protein. (869 aa)
	DUI87_07906	PDZ domain-containing protein. (292 aa)
	DUI87_08772	Uncharacterized protein. (1221 aa)
	DUI87_07119	Uncharacterized protein. (390 aa)
	DUI87_07495	Uncharacterized protein. (1684 aa)
	DUI87_10611	PDZ domain-containing protein. (389 aa)
	DUI87_07556	Uncharacterized protein. (297 aa)
	DUI87_07243	PDZ domain-containing protein. (215 aa)
	DUI87_06881	Uncharacterized protein. (666 aa)
	DUI87_10208	Uncharacterized protein. (1883 aa)
	DUI87_09118	Uncharacterized protein. (1573 aa)
	DUI87_09677	PDZ domain-containing protein. (416 aa)
	DUI87_09478	Uncharacterized protein. (497 aa)
	DUI87_08771	Uncharacterized protein. (1028 aa)
	DUI87_08932	Uncharacterized protein. (1625 aa)
	DUI87_08682	PDZ domain-containing protein. (90 aa)
	DUI87_08624	PDZ domain-containing protein. (1294 aa)
	DUI87_10914	Uncharacterized protein. (966 aa)
	DUI87_10440	Uncharacterized protein. (1130 aa)
	DUI87_16399	PDZ domain-containing protein. (1389 aa)
	DUI87_10261	Uncharacterized protein. (1631 aa)
	DUI87_13187	Uncharacterized protein. (1180 aa)
	DUI87_09778	Uncharacterized protein. (813 aa)
	DUI87_11752	PDZ domain-containing protein. (193 aa)
	DUI87_12872	PDZ domain-containing protein. (946 aa)
	DUI87_11420	Uncharacterized protein. (473 aa)
	DUI87_11849	PDZ domain-containing protein. (471 aa)
	DUI87_11794	Uncharacterized protein; Belongs to the MAGUK family. (1820 aa)
	DUI87_11704	Uncharacterized protein. (1989 aa)
	DUI87_11461	Uncharacterized protein. (1136 aa)
	DUI87_11572	Uncharacterized protein. (947 aa)
	DUI87_14868	Uncharacterized protein. (1126 aa)
	DUI87_12424	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2494 aa)
	DUI87_12781	Uncharacterized protein. (1080 aa)
	DUI87_12390	Tax1-binding protein 3; May regulate a number of protein-protein interactions by competing for PDZ domain binding sites. (124 aa)
	DUI87_13210	Uncharacterized protein. (3974 aa)
	DUI87_13192	PDZ domain-containing protein. (124 aa)
	DUI87_12876	Uncharacterized protein. (314 aa)
	DUI87_12668	PDZ domain-containing protein. (210 aa)
	DUI87_15001	Uncharacterized protein. (1786 aa)
	DUI87_14394	Uncharacterized protein. (488 aa)
	DUI87_14226	Uncharacterized protein. (357 aa)
	DUI87_15112	Uncharacterized protein. (543 aa)
	DUI87_14792	PDZ domain-containing protein. (317 aa)
	DUI87_14483	PDZ domain-containing protein. (684 aa)
	DUI87_17317	WD_REPEATS_REGION domain-containing protein. (1029 aa)
	DUI87_16716	Uncharacterized protein. (631 aa)
	DUI87_18059	Uncharacterized protein. (1993 aa)
	DUI87_15898	Uncharacterized protein. (1807 aa)
	DUI87_15918	Uncharacterized protein. (1770 aa)
	DUI87_15812	Uncharacterized protein. (1157 aa)
	DUI87_15677	Uncharacterized protein; Belongs to the MAGUK family. (746 aa)
	DUI87_17584	PDZ domain-containing protein. (240 aa)
	DUI87_17524	Uncharacterized protein. (711 aa)
	DUI87_18303	Uncharacterized protein; Belongs to the MAGUK family. (540 aa)
	DUI87_18026	Uncharacterized protein; Belongs to the MAGUK family. (734 aa)
	DUI87_17995	Uncharacterized protein. (1063 aa)
	DUI87_18899	Uncharacterized protein. (1214 aa)
	DUI87_21283	Uncharacterized protein; Belongs to the MAGUK family. (1705 aa)
	DUI87_21693	Uncharacterized protein. (519 aa)
	DUI87_21771	Uncharacterized protein. (1255 aa)
	DUI87_22324	Uncharacterized protein. (752 aa)
	DUI87_20325	Uncharacterized protein. (368 aa)
	DUI87_26691	PDZ domain-containing protein. (206 aa)
	DUI87_23101	Uncharacterized protein. (1733 aa)
	DUI87_23095	PDZ domain-containing protein. (190 aa)
	DUI87_21188	Uncharacterized protein. (665 aa)
	DUI87_24074	PDZ domain-containing protein. (132 aa)
	DUI87_22475	Uncharacterized protein. (669 aa)
	DUI87_24524	Uncharacterized protein. (700 aa)
	DUI87_22327	PDZ domain-containing protein. (229 aa)
	DUI87_22575	Uncharacterized protein. (1521 aa)
	DUI87_22480	Uncharacterized protein. (588 aa)
	DUI87_22476	Uncharacterized protein; Belongs to the MAGUK family. (1101 aa)
	DUI87_23059	Uncharacterized protein; Belongs to the MAGUK family. (675 aa)
	DUI87_25228	Uncharacterized protein; Belongs to the MAGUK family. (445 aa)
	DUI87_29672	Uncharacterized protein. (486 aa)
	DUI87_24075	Uncharacterized protein. (1497 aa)
	DUI87_24574	Uncharacterized protein. (324 aa)
	DUI87_24448	Uncharacterized protein. (1057 aa)
	DUI87_24527	Uncharacterized protein. (704 aa)
	DUI87_24530	PDZ domain-containing protein. (150 aa)
	DUI87_24573	PDZ domain-containing protein. (1003 aa)
	DUI87_24886	PDZ domain-containing protein. (6735 aa)
	DUI87_25250	Uncharacterized protein; Belongs to the MAGUK family. (825 aa)
	DUI87_25210	Uncharacterized protein. (1706 aa)
	DUI87_31535	Uncharacterized protein. (420 aa)
	DUI87_25088	Uncharacterized protein. (1205 aa)
	DUI87_25164	Uncharacterized protein. (686 aa)
	DUI87_28027	Uncharacterized protein. (356 aa)
	DUI87_25336	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family. (197 aa)
	DUI87_25605	PDZ domain-containing protein. (106 aa)
	DUI87_26861	Uncharacterized protein. (1654 aa)
	DUI87_28762	Uncharacterized protein. (443 aa)
	DUI87_29260	Uncharacterized protein; Belongs to the MAGUK family. (1685 aa)
	DUI87_28048	Uncharacterized protein. (1677 aa)
	DUI87_27918	Uncharacterized protein. (1778 aa)
	DUI87_28095	PDZ domain-containing protein. (140 aa)
	DUI87_27698	Uncharacterized protein. (488 aa)
	DUI87_28064	Uncharacterized protein. (469 aa)
	DUI87_28335	Uncharacterized protein. (685 aa)
	DUI87_27874	Uncharacterized protein. (296 aa)
	IL16	Pro-interleukin-16; Interleukin-16 stimulates a migratory response in CD4+ lymphocytes, monocytes, and eosinophils. Primes CD4+ T-cells for IL-2 and IL-15 responsiveness. Also induces T-lymphocyte expression of interleukin 2 receptor. Ligand for CD4. (1283 aa)
	DUI87_29263	Uncharacterized protein. (729 aa)
	DUI87_31552	Uncharacterized protein. (1514 aa)
	DUI87_29829	Uncharacterized protein. (1706 aa)
	DUI87_30245	Uncharacterized protein. (555 aa)
	DUI87_30989	Uncharacterized protein. (818 aa)
	DUI87_29803	PDZ domain-containing protein. (598 aa)
	DUI87_30199	Uncharacterized protein. (937 aa)
	DUI87_31016	PDZ domain-containing protein. (343 aa)
	DUI87_33070	PDZ domain-containing protein. (1211 aa)
	DUI87_31359	PDZ domain-containing protein. (261 aa)
	DUI87_31399	Uncharacterized protein. (345 aa)
	DUI87_32429	Uncharacterized protein. (722 aa)
	DUI87_31846	Uncharacterized protein. (699 aa)
	DUI87_32556	Uncharacterized protein. (307 aa)
	DUI87_32866	Uncharacterized protein. (1393 aa)
	DUI87_33039	Uncharacterized protein. (810 aa)
	DUI87_03869	Uncharacterized protein; Belongs to the MAGUK family. (1233 aa)
	DUI87_03978	Uncharacterized protein. (1694 aa)
	DUI87_04597	Uncharacterized protein. (800 aa)
	IL16-2	Pro-interleukin-16; Interleukin-16 stimulates a migratory response in CD4+ lymphocytes, monocytes, and eosinophils. Primes CD4+ T-cells for IL-2 and IL-15 responsiveness. Also induces T-lymphocyte expression of interleukin 2 receptor. Ligand for CD4. (2293 aa)
	DUI87_10444	Uncharacterized protein. (525 aa)
	DUI87_04438	Uncharacterized protein. (1349 aa)
	DUI87_05019	Uncharacterized protein. (1590 aa)
	DUI87_05310	Uncharacterized protein. (1076 aa)
	DUI87_05168	Uncharacterized protein. (1746 aa)

Your Current Organism:

Hirundo rustica

NCBI taxonomy Id: 333673
Other names: H. rustica rustica, Hirundo rustica rustica

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DUI87_00188	DUI87_15677	A0A3M0LBS3	A0A3M0JZ57	PDZ domain-containing protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.514
DUI87_03869	DUI87_03978	A0A3M0L1N8	A0A3M0L1N1	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.670
DUI87_03869	DUI87_04359	A0A3M0L1N8	A0A3M0L625	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.594
DUI87_03869	DUI87_05019	A0A3M0L1N8	A0A3M0KXV8	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.440
DUI87_03869	DUI87_05168	A0A3M0L1N8	A0A3M0KXH4	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.552
DUI87_03869	DUI87_05183	A0A3M0L1N8	A0A3M0L3I3	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.574
DUI87_03869	DUI87_07556	A0A3M0L1N8	A0A3M0KQC8	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.552
DUI87_03869	DUI87_08932	A0A3M0L1N8	A0A3M0KKR5	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.953
DUI87_03869	DUI87_09778	A0A3M0L1N8	A0A3M0KGK7	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.594
DUI87_03869	DUI87_10208	A0A3M0L1N8	A0A3M0KN69	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.994
DUI87_03869	DUI87_10611	A0A3M0L1N8	A0A3M0KQD6	Uncharacterized protein; Belongs to the MAGUK family.	PDZ domain-containing protein.	0.552
DUI87_03869	DUI87_11572	A0A3M0L1N8	A0A3M0KDX9	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.552
DUI87_03869	DUI87_11849	A0A3M0L1N8	A0A3M0KEZ8	Uncharacterized protein; Belongs to the MAGUK family.	PDZ domain-containing protein.	0.552
DUI87_03869	DUI87_15001	A0A3M0L1N8	A0A3M0K865	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.670
DUI87_03869	DUI87_16716	A0A3M0L1N8	A0A3M0K1S5	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.657
DUI87_03869	DUI87_17995	A0A3M0L1N8	A0A3M0JUZ9	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.596
DUI87_03869	DUI87_21693	A0A3M0L1N8	A0A3M0JSE7	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.576
DUI87_03869	DUI87_22476	A0A3M0L1N8	A0A3M0JI69	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein; Belongs to the MAGUK family.	0.571
DUI87_03869	DUI87_23095	A0A3M0L1N8	A0A3M0JN61	Uncharacterized protein; Belongs to the MAGUK family.	PDZ domain-containing protein.	0.552
DUI87_03869	DUI87_24074	A0A3M0L1N8	A0A3M0JKX8	Uncharacterized protein; Belongs to the MAGUK family.	PDZ domain-containing protein.	0.488