(4 nodes) G-protein, beta subunit network (Hirundo rustica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DUI87_21145	WD_REPEATS_REGION domain-containing protein. (501 aa)
	DUI87_31862	WD_REPEATS_REGION domain-containing protein. (346 aa)
	DUI87_29210	WD_REPEATS_REGION domain-containing protein. (390 aa)
	DUI87_17071	Uncharacterized protein. (1034 aa)

Your Current Organism:

Hirundo rustica

NCBI taxonomy Id: 333673
Other names: H. rustica rustica, Hirundo rustica rustica

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DUI87_21145	DUI87_29210	A0A3M0JM15	A0A3M0J270	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.939
DUI87_21145	DUI87_31862	A0A3M0JM15	A0A3M0IY31	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.903
DUI87_29210	DUI87_21145	A0A3M0J270	A0A3M0JM15	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.939
DUI87_29210	DUI87_31862	A0A3M0J270	A0A3M0IY31	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.938
DUI87_31862	DUI87_21145	A0A3M0IY31	A0A3M0JM15	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.903
DUI87_31862	DUI87_29210	A0A3M0IY31	A0A3M0J270	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.938