(18 nodes) G protein alpha subunit, helical insertion network (Hirundo rustica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DUI87_03854	Uncharacterized protein. (401 aa)
	DUI87_28278	Uncharacterized protein. (377 aa)
	DUI87_27972	Uncharacterized protein. (404 aa)
	DUI87_24178	Uncharacterized protein. (354 aa)
	DUI87_23396	Uncharacterized protein. (149 aa)
	DUI87_23394	Uncharacterized protein. (386 aa)
	DUI87_24177	Uncharacterized protein. (354 aa)
	DUI87_22602	Uncharacterized protein. (359 aa)
	DUI87_23395	Uncharacterized protein. (208 aa)
	DUI87_17540	Uncharacterized protein. (355 aa)
	DUI87_14143	Uncharacterized protein. (389 aa)
	DUI87_05311	Uncharacterized protein. (385 aa)
	DUI87_13435	Uncharacterized protein. (98 aa)
	DUI87_13196	Uncharacterized protein. (354 aa)
	DUI87_13195	Uncharacterized protein. (357 aa)
	DUI87_13450	RNase H domain-containing protein. (559 aa)
	DUI87_07788	Uncharacterized protein. (153 aa)
	DUI87_07789	Uncharacterized protein. (220 aa)

Your Current Organism:

Hirundo rustica

NCBI taxonomy Id: 333673
Other names: H. rustica rustica, Hirundo rustica rustica

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DUI87_03854	DUI87_05311	A0A3M0L1B2	A0A3M0LER3	Uncharacterized protein.	Uncharacterized protein.	0.658
DUI87_03854	DUI87_13195	A0A3M0L1B2	A0A3M0KCX3	Uncharacterized protein.	Uncharacterized protein.	0.622
DUI87_03854	DUI87_13196	A0A3M0L1B2	A0A3M0KB82	Uncharacterized protein.	Uncharacterized protein.	0.599
DUI87_03854	DUI87_14143	A0A3M0L1B2	A0A3M0K7E9	Uncharacterized protein.	Uncharacterized protein.	0.919
DUI87_03854	DUI87_17540	A0A3M0L1B2	A0A3M0JYU2	Uncharacterized protein.	Uncharacterized protein.	0.589
DUI87_03854	DUI87_22602	A0A3M0L1B2	A0A3M0JJQ1	Uncharacterized protein.	Uncharacterized protein.	0.907
DUI87_03854	DUI87_23394	A0A3M0L1B2	A0A3M0JGA9	Uncharacterized protein.	Uncharacterized protein.	0.623
DUI87_03854	DUI87_23395	A0A3M0L1B2	A0A3M0JYH0	Uncharacterized protein.	Uncharacterized protein.	0.594
DUI87_03854	DUI87_23396	A0A3M0L1B2	A0A3M0JFV5	Uncharacterized protein.	Uncharacterized protein.	0.609
DUI87_03854	DUI87_24177	A0A3M0L1B2	A0A3M0JGF4	Uncharacterized protein.	Uncharacterized protein.	0.597
DUI87_03854	DUI87_24178	A0A3M0L1B2	A0A3M0JEN4	Uncharacterized protein.	Uncharacterized protein.	0.621
DUI87_03854	DUI87_28278	A0A3M0L1B2	A0A3M0J1H7	Uncharacterized protein.	Uncharacterized protein.	0.664
DUI87_05311	DUI87_03854	A0A3M0LER3	A0A3M0L1B2	Uncharacterized protein.	Uncharacterized protein.	0.658
DUI87_05311	DUI87_07788	A0A3M0LER3	A0A3M0KRH9	Uncharacterized protein.	Uncharacterized protein.	0.878
DUI87_05311	DUI87_07789	A0A3M0LER3	A0A3M0L8L8	Uncharacterized protein.	Uncharacterized protein.	0.881
DUI87_05311	DUI87_13195	A0A3M0LER3	A0A3M0KCX3	Uncharacterized protein.	Uncharacterized protein.	0.645
DUI87_05311	DUI87_13196	A0A3M0LER3	A0A3M0KB82	Uncharacterized protein.	Uncharacterized protein.	0.454
DUI87_05311	DUI87_13435	A0A3M0LER3	A0A3M0K909	Uncharacterized protein.	Uncharacterized protein.	0.655
DUI87_05311	DUI87_13450	A0A3M0LER3	A0A3M0KEL7	Uncharacterized protein.	RNase H domain-containing protein.	0.637
DUI87_05311	DUI87_14143	A0A3M0LER3	A0A3M0K7E9	Uncharacterized protein.	Uncharacterized protein.	0.647