(10 nodes) SCF-beta-TrCP mediated degradation of Emi1 network (Hirundo rustica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DUI87_15490	Ubiquitin-like domain-containing protein. (156 aa)
	DUI87_14815	WD_REPEATS_REGION domain-containing protein. (503 aa)
	DUI87_10454	RGS domain-containing protein. (769 aa)
	DUI87_07279	Uncharacterized protein. (493 aa)
	DUI87_12395	Uncharacterized protein. (473 aa)
	DUI87_11580	Uncharacterized protein. (519 aa)
	DUI87_26851	Uncharacterized protein; Belongs to the SKP1 family. (165 aa)
	DUI87_33829	KxDL domain-containing protein. (176 aa)
	DUI87_22483	WD_REPEATS_REGION domain-containing protein. (472 aa)
	DUI87_18591	CULLIN_2 domain-containing protein; Belongs to the cullin family. (671 aa)

Your Current Organism:

Hirundo rustica

NCBI taxonomy Id: 333673
Other names: H. rustica rustica, Hirundo rustica rustica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DUI87_07279	DUI87_11580	A0A3M0KPE2	A0A3M0KFT9	Uncharacterized protein.	Uncharacterized protein.	0.822
DUI87_07279	DUI87_12395	A0A3M0KPE2	A0A3M0KHF6	Uncharacterized protein.	Uncharacterized protein.	0.513
DUI87_07279	DUI87_14815	A0A3M0KPE2	A0A3M0K602	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.973
DUI87_07279	DUI87_15490	A0A3M0KPE2	A0A3M0K4K2	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.472
DUI87_07279	DUI87_18591	A0A3M0KPE2	A0A3M0JZ22	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.859
DUI87_07279	DUI87_22483	A0A3M0KPE2	A0A3M0JJ07	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.953
DUI87_07279	DUI87_26851	A0A3M0KPE2	A0A3M0J7C1	Uncharacterized protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.891
DUI87_10454	DUI87_11580	A0A3M0L0K5	A0A3M0KFT9	RGS domain-containing protein.	Uncharacterized protein.	0.970
DUI87_10454	DUI87_12395	A0A3M0L0K5	A0A3M0KHF6	RGS domain-containing protein.	Uncharacterized protein.	0.708
DUI87_10454	DUI87_14815	A0A3M0L0K5	A0A3M0K602	RGS domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.995
DUI87_10454	DUI87_15490	A0A3M0L0K5	A0A3M0K4K2	RGS domain-containing protein.	Ubiquitin-like domain-containing protein.	0.712
DUI87_10454	DUI87_18591	A0A3M0L0K5	A0A3M0JZ22	RGS domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.958
DUI87_10454	DUI87_22483	A0A3M0L0K5	A0A3M0JJ07	RGS domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.992
DUI87_10454	DUI87_26851	A0A3M0L0K5	A0A3M0J7C1	RGS domain-containing protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.981
DUI87_11580	DUI87_07279	A0A3M0KFT9	A0A3M0KPE2	Uncharacterized protein.	Uncharacterized protein.	0.822
DUI87_11580	DUI87_10454	A0A3M0KFT9	A0A3M0L0K5	Uncharacterized protein.	RGS domain-containing protein.	0.970
DUI87_11580	DUI87_12395	A0A3M0KFT9	A0A3M0KHF6	Uncharacterized protein.	Uncharacterized protein.	0.953
DUI87_11580	DUI87_14815	A0A3M0KFT9	A0A3M0K602	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.553
DUI87_11580	DUI87_15490	A0A3M0KFT9	A0A3M0K4K2	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.955
DUI87_11580	DUI87_18591	A0A3M0KFT9	A0A3M0JZ22	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.999