(39 nodes) Regulation of TNFR1 signaling network (Hirundo rustica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DUI87_27921	RING-type domain-containing protein. (367 aa)
	DUI87_35362	USP domain-containing protein; Belongs to the peptidase C19 family. (559 aa)
	DUI87_33829	KxDL domain-containing protein. (176 aa)
	DUI87_32996	Uncharacterized protein. (857 aa)
	DUI87_31856	Uncharacterized protein. (1011 aa)
	DUI87_31541	Ubiquitin carboxyl-terminal hydrolase. (394 aa)
	DUI87_30240	WD_REPEATS_REGION domain-containing protein. (330 aa)
	DUI87_17458	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (216 aa)
	DUI87_26934	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (220 aa)
	DUI87_28037	Uncharacterized protein. (523 aa)
	DUI87_25320	Uncharacterized protein. (494 aa)
	DUI87_24020	Uncharacterized protein. (84 aa)
	DUI87_24021	Protein kinase domain-containing protein. (307 aa)
	DUI87_24017	Uncharacterized protein. (1092 aa)
	DUI87_30275	Uncharacterized protein. (465 aa)
	DUI87_23381	Ubiquitin carboxyl-terminal hydrolase. (975 aa)
	DUI87_25122	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (407 aa)
	DUI87_22449	PA domain-containing protein. (515 aa)
	DUI87_18063	OTU domain-containing protein. (356 aa)
	DUI87_17415	Protein kinase domain-containing protein. (1398 aa)
	DUI87_05546	Uncharacterized protein. (313 aa)
	DUI87_08299	Uncharacterized protein. (780 aa)
	DUI87_04507	DUF4203 domain-containing protein. (358 aa)
	DUI87_04330	Uncharacterized protein; Belongs to the peptidase C14A family. (457 aa)
	DUI87_09810	Uncharacterized protein. (605 aa)
	DUI87_08118	Uncharacterized protein. (406 aa)
	DUI87_06867	Uncharacterized protein; Belongs to the peptidase C19 family. (784 aa)
	DUI87_11946	Protein kinase domain-containing protein. (676 aa)
	DUI87_09104	CASPASE_P10 domain-containing protein; Belongs to the peptidase C14A family. (136 aa)
	DUI87_16830	CARD domain-containing protein. (577 aa)
	DUI87_10363	Uncharacterized protein. (953 aa)
	DUI87_12395	Uncharacterized protein. (473 aa)
	DUI87_12382	Protein kinase domain-containing protein. (913 aa)
	DUI87_17127	Uncharacterized protein. (421 aa)
	DUI87_14139	Death domain-containing protein. (361 aa)
	DUI87_14091	Uncharacterized protein. (763 aa)
	DUI87_14092	USP domain-containing protein. (161 aa)
	DUI87_15490	Ubiquitin-like domain-containing protein. (156 aa)
	DUI87_18332	Uncharacterized protein. (757 aa)

Your Current Organism:

Hirundo rustica

NCBI taxonomy Id: 333673
Other names: H. rustica rustica, Hirundo rustica rustica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DUI87_04330	DUI87_06867	A0A3M0KZ73	A0A3M0KNK4	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.937
DUI87_04330	DUI87_08299	A0A3M0KZ73	A0A3M0KZD1	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.997
DUI87_04330	DUI87_09104	A0A3M0KZ73	A0A3M0KL96	Uncharacterized protein; Belongs to the peptidase C14A family.	CASPASE_P10 domain-containing protein; Belongs to the peptidase C14A family.	0.995
DUI87_04330	DUI87_10363	A0A3M0KZ73	A0A3M0KHW7	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.765
DUI87_04330	DUI87_12395	A0A3M0KZ73	A0A3M0KHF6	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.476
DUI87_04330	DUI87_14091	A0A3M0KZ73	A0A3M0K7K5	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.935
DUI87_04330	DUI87_14092	A0A3M0KZ73	A0A3M0K7A6	Uncharacterized protein; Belongs to the peptidase C14A family.	USP domain-containing protein.	0.935
DUI87_04330	DUI87_14139	A0A3M0KZ73	A0A3M0K7R0	Uncharacterized protein; Belongs to the peptidase C14A family.	Death domain-containing protein.	0.995
DUI87_04330	DUI87_15490	A0A3M0KZ73	A0A3M0K4K2	Uncharacterized protein; Belongs to the peptidase C14A family.	Ubiquitin-like domain-containing protein.	0.610
DUI87_04330	DUI87_16830	A0A3M0KZ73	A0A3M0KJJ2	Uncharacterized protein; Belongs to the peptidase C14A family.	CARD domain-containing protein.	0.941
DUI87_04330	DUI87_17127	A0A3M0KZ73	A0A3M0K9B7	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.867
DUI87_04330	DUI87_24017	A0A3M0KZ73	A0A3M0JES0	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.451
DUI87_04330	DUI87_25320	A0A3M0KZ73	A0A3M0JC82	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.965
DUI87_04330	DUI87_27921	A0A3M0KZ73	A0A3M0J407	Uncharacterized protein; Belongs to the peptidase C14A family.	RING-type domain-containing protein.	0.901
DUI87_04330	DUI87_30275	A0A3M0KZ73	A0A3M0JFW7	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.984
DUI87_04330	DUI87_31856	A0A3M0KZ73	A0A3M0IRQ9	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.925
DUI87_04507	DUI87_06867	A0A3M0KZ86	A0A3M0KNK4	DUF4203 domain-containing protein.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.636
DUI87_04507	DUI87_08299	A0A3M0KZ86	A0A3M0KZD1	DUF4203 domain-containing protein.	Uncharacterized protein.	0.618
DUI87_04507	DUI87_09104	A0A3M0KZ86	A0A3M0KL96	DUF4203 domain-containing protein.	CASPASE_P10 domain-containing protein; Belongs to the peptidase C14A family.	0.709
DUI87_04507	DUI87_12395	A0A3M0KZ86	A0A3M0KHF6	DUF4203 domain-containing protein.	Uncharacterized protein.	0.449