STRINGSTRING
FMG_0534 FMG_0534 FMG_0648 FMG_0648 FMG_0649 FMG_0649 FMG_0650 FMG_0650 FMG_0651 FMG_0651 rnr rnr smpB smpB FMG_0655 FMG_0655 FMG_0656 FMG_0656 FMG_0659 FMG_0659 priA priA def def fmt fmt FMG_0663 FMG_0663 FMG_0664 FMG_0664 rlmN rlmN FMG_0666 FMG_0666 FMG_0667 FMG_0667 rsgA rsgA FMG_0669 FMG_0669 FMG_0670 FMG_0670 FMG_0671 FMG_0671 coaX coaX FMG_1429 FMG_1429 FMG_1430 FMG_1430
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FMG_0534Molybdopterin biosynthesis protein. (162 aa)
FMG_0648Conserved hypothetical protein. (266 aa)
FMG_0649Molybdate ABC transporter substrate-binding protein. (268 aa)
FMG_0650Molybdate ABC transporter permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (231 aa)
FMG_0651ABC transporter ATP-binding protein. (204 aa)
rnrExoribonucleases; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. (701 aa)
smpBSsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] (149 aa)
FMG_0655Conserved hypothetical protein. (291 aa)
FMG_0656Conserved hypothetical protein; Belongs to the RemA family. (83 aa)
FMG_0659Phosphopantothenate-cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (388 aa)
priAPrimosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (789 aa)
defPolypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. (162 aa)
fmtmethionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. (310 aa)
FMG_0663Conserved hypothetical protein. (227 aa)
FMG_0664Putative rRNA methylase; SUN family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (423 aa)
rlmNPutative Fe-S-cluster redox protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. (349 aa)
FMG_0666Serine/threonine phosphatases. (245 aa)
FMG_0667Serine/threonine protein kinase. (627 aa)
rsgAPutative GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. (292 aa)
FMG_0669Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (218 aa)
FMG_0670Conserved hypothetical protein. (179 aa)
FMG_0671Putative thiamin pyrophosphokinase. (210 aa)
coaXTranscriptional regulator Baf family; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis; Belongs to the type III pantothenate kinase family. (262 aa)
FMG_1429Molybdenum cofactor biosynthesis protein C. (294 aa)
FMG_1430Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. (315 aa)
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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