STRINGSTRING
GCA_000826145_01180 GCA_000826145_01180 GCA_000826145_01807 GCA_000826145_01807 GCA_000826145_02679 GCA_000826145_02679 GCA_000826145_02680 GCA_000826145_02680 GCA_000826145_02682 GCA_000826145_02682 GCA_000826145_02683 GCA_000826145_02683
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_000826145_01180Unannotated protein. (264 aa)
GCA_000826145_01807Unannotated protein. (238 aa)
GCA_000826145_02679Unannotated protein. (260 aa)
GCA_000826145_02680Unannotated protein. (230 aa)
GCA_000826145_02682Unannotated protein. (442 aa)
GCA_000826145_02683Unannotated protein. (251 aa)
Your Current Organism:
Sporosarcina koreensis
NCBI taxonomy Id: 334735
Other names: DSM 16921, JCM 16400, KACC 11299, S. koreensis, Sporosarcina koreensis Kwon et al. 2007, Sporosarcina sp. F73, strain F73
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