(12 nodes) TRAPP complex network (Fusarium verticillioides)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FVEG_14798	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (150 aa)
	FVEG_04954	Uncharacterized protein. (318 aa)
	FVEG_04550	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic. (221 aa)
	FVEG_02680	Uncharacterized protein. (231 aa)
	FVEG_04869	Uncharacterized protein. (1425 aa)
	FVEG_06029	Foie-gras_1 domain-containing protein. (1511 aa)
	FVEG_16280	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (145 aa)
	FVEG_16532	Uncharacterized protein. (218 aa)
	FVEG_07034	Uncharacterized protein. (162 aa)
	FVEG_10217	Uncharacterized protein. (433 aa)
	FVEG_09274	Trafficking protein particle complex subunit BET3. (192 aa)
	FVEG_10456	Uncharacterized protein. (757 aa)

Your Current Organism:

Fusarium verticillioides

NCBI taxonomy Id: 334819
Other names: F. verticillioides 7600, Fusarium verticillioides 7600, Gibberella moniliformis 7600

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FVEG_02680	FVEG_04550	W7M5K6	W7M5K4	Uncharacterized protein.	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	0.999
FVEG_02680	FVEG_04869	W7M5K6	W7M716	Uncharacterized protein.	Uncharacterized protein.	0.998
FVEG_02680	FVEG_04954	W7M5K6	W7LY50	Uncharacterized protein.	Uncharacterized protein.	0.981
FVEG_02680	FVEG_06029	W7M5K6	W7MBW8	Uncharacterized protein.	Foie-gras_1 domain-containing protein.	0.999
FVEG_02680	FVEG_07034	W7M5K6	W7MPR2	Uncharacterized protein.	Uncharacterized protein.	0.999
FVEG_02680	FVEG_09274	W7M5K6	W7MZV0	Uncharacterized protein.	Trafficking protein particle complex subunit BET3.	0.999
FVEG_02680	FVEG_10217	W7M5K6	W7MTW3	Uncharacterized protein.	Uncharacterized protein.	0.992
FVEG_02680	FVEG_10456	W7M5K6	W7N4H4	Uncharacterized protein.	Uncharacterized protein.	0.997
FVEG_02680	FVEG_14798	W7M5K6	W7LGU4	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.999
FVEG_02680	FVEG_16280	W7M5K6	W7ML68	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.999
FVEG_02680	FVEG_16532	W7M5K6	W7MPQ0	Uncharacterized protein.	Uncharacterized protein.	0.983
FVEG_04550	FVEG_02680	W7M5K4	W7M5K6	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	Uncharacterized protein.	0.999
FVEG_04550	FVEG_04869	W7M5K4	W7M716	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	Uncharacterized protein.	0.999
FVEG_04550	FVEG_04954	W7M5K4	W7LY50	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	Uncharacterized protein.	0.981
FVEG_04550	FVEG_06029	W7M5K4	W7MBW8	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	Foie-gras_1 domain-containing protein.	0.999
FVEG_04550	FVEG_07034	W7M5K4	W7MPR2	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	Uncharacterized protein.	0.999
FVEG_04550	FVEG_09274	W7M5K4	W7MZV0	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	Trafficking protein particle complex subunit BET3.	0.999
FVEG_04550	FVEG_10217	W7M5K4	W7MTW3	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	Uncharacterized protein.	0.989
FVEG_04550	FVEG_10456	W7M5K4	W7N4H4	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	Uncharacterized protein.	0.999
FVEG_04550	FVEG_14798	W7M5K4	W7LGU4	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.999