(68 nodes) Mixed, incl. Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others), and Leucine-rich repeats, typical (most populated) subfamily network (Gambusia affinis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CCH79_00007417	Uncharacterized protein. (410 aa)
	CCH79_00014103	Uncharacterized protein. (715 aa)
	CCH79_00008599	Uncharacterized protein. (367 aa)
	CCH79_00010460	Uncharacterized protein. (463 aa)
	CCH79_00019467	Uncharacterized protein. (174 aa)
	ENSGAFP00000001995	SLIT and NTRK-like family, member 5b. (449 aa)
	ENSGAFP00000002477	Leucine rich repeat containing 39. (323 aa)
	CCH79_00016786	Uncharacterized protein. (1448 aa)
	CCH79_00000521	Uncharacterized protein. (1453 aa)
	ENSGAFP00000003648	annotation not available (911 aa)
	CCH79_00007528	LRRCT domain-containing protein. (372 aa)
	CCH79_00000670	Uncharacterized protein. (993 aa)
	ENSGAFP00000004211	MAM and LDL receptor class A domain containing 1. (1824 aa)
	CCH79_00019589	Uncharacterized protein. (297 aa)
	ENSGAFP00000004482	annotation not available (142 aa)
	CCH79_00012875	Uncharacterized protein. (2977 aa)
	CCH79_00007546	Uncharacterized protein. (1448 aa)
	CCH79_00006530	Uncharacterized protein. (461 aa)
	ENSGAFP00000005407	Si:dkey-28o19.1. (638 aa)
	CCH79_00004392	Protein kinase domain-containing protein. (372 aa)
	ENSGAFP00000006138	annotation not available (103 aa)
	CCH79_00001428	Uncharacterized protein. (458 aa)
	CCH79_00003085	Uncharacterized protein. (651 aa)
	ENSGAFP00000006381	annotation not available (652 aa)
	MAMDC2	Uncharacterized protein. (729 aa)
	PTK7	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1075 aa)
	ENSGAFP00000006573	annotation not available (677 aa)
	ENSGAFP00000006832	Transmembrane protein 110, like. (301 aa)
	CCH79_00003103	Uncharacterized protein. (189 aa)
	CCH79_00011750	Uncharacterized protein. (562 aa)
	CCH79_00012979	Uncharacterized protein. (560 aa)
	ENSGAFP00000010834	NOTCH regulated ankyrin repeat protein a. (112 aa)
	CCH79_00018620	Tyrosine-protein kinase. (235 aa)
	ENSGAFP00000013011	Leucine rich repeat containing 18a. (266 aa)
	CCH79_00006183	Uncharacterized protein. (366 aa)
	CCH79_00001690	Uncharacterized protein. (648 aa)
	CCH79_00003774	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (204 aa)
	CCH79_00003244	Uncharacterized protein. (377 aa)
	CCH79_00008828	Uncharacterized protein. (255 aa)
	ENSGAFP00000018367	annotation not available (248 aa)
	CCH79_00003360	Uncharacterized protein. (372 aa)
	CCH79_00000444	Uncharacterized protein. (321 aa)
	CCH79_00017554	Uncharacterized protein. (1430 aa)
	CCH79_00010907	Uncharacterized protein; Belongs to the peptidase C14A family. (463 aa)
	EGFLAM	Uncharacterized protein. (1059 aa)
	CCH79_00008865	Uncharacterized protein. (496 aa)
	CCH79_00002220	Uncharacterized protein. (902 aa)
	ENSGAFP00000023370	annotation not available (388 aa)
	CCH79_00005534	Ig-like domain-containing protein. (636 aa)
	CCH79_00010365	Uncharacterized protein. (1020 aa)
	CCH79_00011140	SEFIR domain-containing protein. (436 aa)
	CCH79_00002973	Uncharacterized protein. (1031 aa)
	CCH79_00007936	ANK_REP_REGION domain-containing protein. (180 aa)
	CCH79_00008591	VWFA domain-containing protein. (226 aa)
	ENSGAFP00000028029	annotation not available (358 aa)
	CARMIL3	Carm_PH domain-containing protein. (1259 aa)
	CCH79_00012105	Uncharacterized protein. (1236 aa)
	ENSGAFP00000030239	annotation not available (152 aa)
	ENSGAFP00000030241	annotation not available (189 aa)
	ENSGAFP00000030243	annotation not available (135 aa)
	LRRC10B	Leucine rich repeat containing 10B. (403 aa)
	ENSGAFP00000030850	annotation not available (573 aa)
	CCH79_00015328	Uncharacterized protein. (311 aa)
	CCH79_00009652	Uncharacterized protein. (156 aa)
	PTPRM	Uncharacterized protein. (1391 aa)
	ENSGAFP00000031129	Si:ch211-106k21.5. (185 aa)
	ENSGAFP00000031161	Testis associated actin remodelling kinase 2. (616 aa)
	ENSGAFP00000032648	Coiled-coil domain containing 136b. (403 aa)

Your Current Organism:

Gambusia affinis

NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish

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... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CARMIL3	CCH79_00001690	ENSGAFP00000028705	ENSGAFP00000014098	Carm_PH domain-containing protein.	Uncharacterized protein.	0.469
CARMIL3	CCH79_00002220	ENSGAFP00000028705	ENSGAFP00000023184	Carm_PH domain-containing protein.	Uncharacterized protein.	0.564
CARMIL3	CCH79_00003085	ENSGAFP00000028705	ENSGAFP00000006262	Carm_PH domain-containing protein.	Uncharacterized protein.	0.469
CARMIL3	CCH79_00005534	ENSGAFP00000028705	ENSGAFP00000025003	Carm_PH domain-containing protein.	Ig-like domain-containing protein.	0.469
CARMIL3	CCH79_00008865	ENSGAFP00000028705	ENSGAFP00000023182	Carm_PH domain-containing protein.	Uncharacterized protein.	0.438
CARMIL3	CCH79_00010365	ENSGAFP00000028705	ENSGAFP00000025158	Carm_PH domain-containing protein.	Uncharacterized protein.	0.443
CARMIL3	CCH79_00015328	ENSGAFP00000028705	ENSGAFP00000030853	Carm_PH domain-containing protein.	Uncharacterized protein.	0.476
CARMIL3	ENSGAFP00000030850	ENSGAFP00000028705	ENSGAFP00000030850	Carm_PH domain-containing protein.	annotation not available	0.476
CARMIL3	ENSGAFP00000031129	ENSGAFP00000028705	ENSGAFP00000031129	Carm_PH domain-containing protein.	Si:ch211-106k21.5.	0.548
CARMIL3	PTK7	ENSGAFP00000028705	ENSGAFP00000006481	Carm_PH domain-containing protein.	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.608
CCH79_00000444	CCH79_00000521	ENSGAFP00000019820	ENSGAFP00000003445	Uncharacterized protein.	Uncharacterized protein.	0.423
CCH79_00000444	CCH79_00001428	ENSGAFP00000019820	ENSGAFP00000006171	Uncharacterized protein.	Uncharacterized protein.	0.513
CCH79_00000444	CCH79_00002220	ENSGAFP00000019820	ENSGAFP00000023184	Uncharacterized protein.	Uncharacterized protein.	0.470
CCH79_00000444	CCH79_00003103	ENSGAFP00000019820	ENSGAFP00000007221	Uncharacterized protein.	Uncharacterized protein.	0.499
CCH79_00000444	CCH79_00003244	ENSGAFP00000019820	ENSGAFP00000016359	Uncharacterized protein.	Uncharacterized protein.	0.453
CCH79_00000444	CCH79_00006183	ENSGAFP00000019820	ENSGAFP00000013860	Uncharacterized protein.	Uncharacterized protein.	0.611
CCH79_00000444	CCH79_00007546	ENSGAFP00000019820	ENSGAFP00000004709	Uncharacterized protein.	Uncharacterized protein.	0.423
CCH79_00000444	CCH79_00008591	ENSGAFP00000019820	ENSGAFP00000028026	Uncharacterized protein.	VWFA domain-containing protein.	0.403
CCH79_00000444	CCH79_00009652	ENSGAFP00000019820	ENSGAFP00000031002	Uncharacterized protein.	Uncharacterized protein.	0.515
CCH79_00000444	CCH79_00012979	ENSGAFP00000019820	ENSGAFP00000008421	Uncharacterized protein.	Uncharacterized protein.	0.489