5 items (Gambusia affinis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CCH79_00002802	Protein kinase domain-containing protein. (455 aa)
	CCH79_00017048	Protein kinase domain-containing protein. (421 aa)
	CCH79_00013426	Protein kinase domain-containing protein. (441 aa)
	CCH79_00018535	Protein kinase domain-containing protein. (402 aa)
	CCH79_00008056	Uncharacterized protein. (210 aa)

Your Current Organism:

Gambusia affinis

NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCH79_00002802	CCH79_00008056	ENSGAFP00000006961	ENSGAFP00000028328	Protein kinase domain-containing protein.	Uncharacterized protein.	0.872
CCH79_00008056	CCH79_00002802	ENSGAFP00000028328	ENSGAFP00000006961	Uncharacterized protein.	Protein kinase domain-containing protein.	0.872
CCH79_00008056	CCH79_00013426	ENSGAFP00000028328	ENSGAFP00000027573	Uncharacterized protein.	Protein kinase domain-containing protein.	0.872
CCH79_00008056	CCH79_00017048	ENSGAFP00000028328	ENSGAFP00000026902	Uncharacterized protein.	Protein kinase domain-containing protein.	0.872
CCH79_00008056	CCH79_00018535	ENSGAFP00000028328	ENSGAFP00000028028	Uncharacterized protein.	Protein kinase domain-containing protein.	0.872
CCH79_00013426	CCH79_00008056	ENSGAFP00000027573	ENSGAFP00000028328	Protein kinase domain-containing protein.	Uncharacterized protein.	0.872
CCH79_00017048	CCH79_00008056	ENSGAFP00000026902	ENSGAFP00000028328	Protein kinase domain-containing protein.	Uncharacterized protein.	0.872
CCH79_00018535	CCH79_00008056	ENSGAFP00000028028	ENSGAFP00000028328	Protein kinase domain-containing protein.	Uncharacterized protein.	0.872