STRINGSTRING
Swol_0188 Swol_0188 Swol_0531 Swol_0531 Swol_0532 Swol_0532 Swol_0533 Swol_0533 Swol_0534 Swol_0534 Swol_0535 Swol_0535 Swol_0536 Swol_0536 Swol_0537 Swol_0537 Swol_0538 Swol_0538 Swol_0539 Swol_0539 Swol_0540 Swol_0540 Swol_0541 Swol_0541 Swol_0542 Swol_0542 Swol_0543 Swol_0543 aroQ aroQ Swol_0545 Swol_0545 Swol_0701 Swol_0701 Swol_0702 Swol_0702 Swol_0839 Swol_0839 Swol_1445 Swol_1445 Swol_1595 Swol_1595 Swol_1596 Swol_1596 Swol_1710 Swol_1710
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Swol_0188KEGG: mta:Moth_0225 phosphoribosyltransferase. (239 aa)
Swol_0531KEGG: mta:Moth_1554 type II secretion system protein E. (417 aa)
Swol_0532KEGG: mta:Moth_1553 twitching motility protein. (350 aa)
Swol_0533KEGG: mta:Moth_1552 type II secretion system protein. (402 aa)
Swol_0534Hypothetical protein; KEGG: tte:TTE1265 type IV pilus assembly protein PilA. (140 aa)
Swol_0535Hypothetical protein. (143 aa)
Swol_0536Hypothetical protein. (156 aa)
Swol_0537Hypothetical protein. (170 aa)
Swol_0538Type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A; KEGG: tte:TTE1266 leader peptidase (prepilin peptidase) / N-methyltransferase. (250 aa)
Swol_0539Tfp pilus assembly protein ATPase PilM-like protein; KEGG: dra:DR0770 fimbrial assembly protein PilM, putative. (353 aa)
Swol_0540Hypothetical protein. (154 aa)
Swol_0541Hypothetical protein; KEGG: tte:TTE1274 Fimbrial assembly protein. (264 aa)
Swol_0542Microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62; KEGG: mta:Moth_1542 peptidase U62, modulator of DNA gyrase. (475 aa)
Swol_0543KEGG: mta:Moth_1541 peptidase U62, modulator of DNA gyrase. (446 aa)
aroQ3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. (152 aa)
Swol_0545KEGG: chy:CHY_1873 aminopeptidase P. (357 aa)
Swol_0701KEGG: dde:Dde_3684 hypothetical protein. (176 aa)
Swol_0702KEGG: xac:XAC0531 hypothetical protein. (130 aa)
Swol_0839KEGG: tte:TTE1450 predicted Rossmann-fold nucleotide-binding protein involved in DNA uptake. (362 aa)
Swol_1445KEGG: mta:Moth_1022 Mg chelatase-related protein. (511 aa)
Swol_1595KEGG: mta:Moth_0575 DNA internalization-related competence protein ComEC/Rec2. (761 aa)
Swol_1596KEGG: mta:Moth_0570 competence protein ComEA helix-hairpin-helix region. (207 aa)
Swol_1710Hydrolase (metallo-beta-lactamase superfamily)-like protein; KEGG: mta:Moth_1254 beta-lactamase-like. (390 aa)
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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