STRINGSTRING
Swol_0512 Swol_0512 Swol_0513 Swol_0513 Swol_0514 Swol_0514 Swol_0515 Swol_0515 Swol_0516 Swol_0516 Swol_2253 Swol_2253 Swol_2254 Swol_2254 Swol_2255 Swol_2255 Swol_2256 Swol_2256 Swol_2257 Swol_2257 Swol_2258 Swol_2258
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Swol_0512KEGG: gka:GK0343 type I restriction modification system M subunit (site-specific DNA-methyltransferase subunit). (489 aa)
Swol_0513Hypothetical protein; KEGG: xfa:XF0296 type I restriction-modification system specificity determinant. (153 aa)
Swol_0514KEGG: tte:TTE1075 hypothetical protein. (548 aa)
Swol_0515KEGG: eba:p2A50 type I restriction-modification system (specificity subunit). (263 aa)
Swol_0516KEGG: gka:GK0346 type I restriction-modification system R subunit (endonuclease). (1115 aa)
Swol_2253KEGG: hch:HCH_03413 subtilisin-like serine protease. (823 aa)
Swol_2254KEGG: hch:HCH_03415 ATPase of the AAA+ class. (321 aa)
Swol_2255KEGG: sat:SYN_02061 zinc metalloprotease. (227 aa)
Swol_2256Type I restriction-modification system, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification. (1061 aa)
Swol_2257Restriction endonuclease S subunits-like protein; KEGG: mja:MJ1218 type I restriction-modification enzyme, S subunit, putative. (413 aa)
Swol_2258KEGG: chy:CHY_0830 type I restriction-modification system, M subunit. (891 aa)
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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