STRINGSTRING
Swol_1017 Swol_1017 Swol_1040 Swol_1040 Swol_1440 Swol_1440 Swol_1925 Swol_1925 Swol_2436 Swol_2436
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Swol_1017KEGG: mta:Moth_1717 iron hydrogenase, small subunit. (574 aa)
Swol_1040Signal transduction histidine kinase regulating C4-dicarboxylate transport system-like protein; KEGG: wsu:WS1436 putative two-component sensor. (696 aa)
Swol_1440Ferridoxin; KEGG: sat:SYN_00800 ferridoxin. (140 aa)
Swol_1925KEGG: sat:SYN_01370 iron only hydrogenase large subunit. (387 aa)
Swol_2436KEGG: det:DET0147 [Fe] hydrogenase, large subunit HymC, putative. (563 aa)
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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