(12 nodes) COP9 signalosome, and Cul4-RING E3 ubiquitin ligase complex network (Zymoseptoria tritici IPO323)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F9WX45_ZYMTI	CSN4 COP9 signalosome complex subunit 4. (374 aa)
	F9WZS8_ZYMTI	CSN7 COP9 signalosome subunit. (249 aa)
	F9X2G6_ZYMTI	Uncharacterized protein. (848 aa)
	F9X339_ZYMTI	WD_REPEATS_REGION domain-containing protein. (454 aa)
	F9X345_ZYMTI	CULLIN_2 domain-containing protein; Belongs to the cullin family. (762 aa)
	COP9	COP9 signalosome complex subunit 5. (334 aa)
	F9X5Q1_ZYMTI	CSN6 COP9 complex subunit 6. (349 aa)
	F9XDP8_ZYMTI	CSN3 COP9 constitutive. (493 aa)
	F9XDZ9_ZYMTI	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. (520 aa)
	F9XGK7_ZYMTI	COP9 singlesome subunit 1. (448 aa)
	F9XJ33_ZYMTI	CPSF_A domain-containing protein. (1143 aa)
	F9XQC5_ZYMTI	CSN2 COP9 signalosome complex. (493 aa)

Your Current Organism:

Zymoseptoria tritici IPO323

NCBI taxonomy Id: 336722
Other names: Mycosphaerella graminicola IPO323, Z. tritici IPO323

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
COP9	F9WX45_ZYMTI	F9X4A2	F9WX45	COP9 signalosome complex subunit 5.	CSN4 COP9 signalosome complex subunit 4.	0.999
COP9	F9WZS8_ZYMTI	F9X4A2	F9WZS8	COP9 signalosome complex subunit 5.	CSN7 COP9 signalosome subunit.	0.980
COP9	F9X339_ZYMTI	F9X4A2	F9X339	COP9 signalosome complex subunit 5.	WD_REPEATS_REGION domain-containing protein.	0.720
COP9	F9X345_ZYMTI	F9X4A2	F9X345	COP9 signalosome complex subunit 5.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.946
COP9	F9X5Q1_ZYMTI	F9X4A2	F9X5Q1	COP9 signalosome complex subunit 5.	CSN6 COP9 complex subunit 6.	0.998
COP9	F9XDP8_ZYMTI	F9X4A2	F9XDP8	COP9 signalosome complex subunit 5.	CSN3 COP9 constitutive.	0.998
COP9	F9XDZ9_ZYMTI	F9X4A2	F9XDZ9	COP9 signalosome complex subunit 5.	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.	0.649
COP9	F9XGK7_ZYMTI	F9X4A2	F9XGK7	COP9 signalosome complex subunit 5.	COP9 singlesome subunit 1.	0.999
COP9	F9XJ33_ZYMTI	F9X4A2	F9XJ33	COP9 signalosome complex subunit 5.	CPSF_A domain-containing protein.	0.901
COP9	F9XQC5_ZYMTI	F9X4A2	F9XQC5	COP9 signalosome complex subunit 5.	CSN2 COP9 signalosome complex.	0.999
F9WX45_ZYMTI	COP9	F9WX45	F9X4A2	CSN4 COP9 signalosome complex subunit 4.	COP9 signalosome complex subunit 5.	0.999
F9WX45_ZYMTI	F9WZS8_ZYMTI	F9WX45	F9WZS8	CSN4 COP9 signalosome complex subunit 4.	CSN7 COP9 signalosome subunit.	0.998
F9WX45_ZYMTI	F9X2G6_ZYMTI	F9WX45	F9X2G6	CSN4 COP9 signalosome complex subunit 4.	Uncharacterized protein.	0.965
F9WX45_ZYMTI	F9X339_ZYMTI	F9WX45	F9X339	CSN4 COP9 signalosome complex subunit 4.	WD_REPEATS_REGION domain-containing protein.	0.702
F9WX45_ZYMTI	F9X345_ZYMTI	F9WX45	F9X345	CSN4 COP9 signalosome complex subunit 4.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.945
F9WX45_ZYMTI	F9X5Q1_ZYMTI	F9WX45	F9X5Q1	CSN4 COP9 signalosome complex subunit 4.	CSN6 COP9 complex subunit 6.	0.999
F9WX45_ZYMTI	F9XDP8_ZYMTI	F9WX45	F9XDP8	CSN4 COP9 signalosome complex subunit 4.	CSN3 COP9 constitutive.	0.999
F9WX45_ZYMTI	F9XDZ9_ZYMTI	F9WX45	F9XDZ9	CSN4 COP9 signalosome complex subunit 4.	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.	0.777
F9WX45_ZYMTI	F9XGK7_ZYMTI	F9WX45	F9XGK7	CSN4 COP9 signalosome complex subunit 4.	COP9 singlesome subunit 1.	0.999
F9WX45_ZYMTI	F9XJ33_ZYMTI	F9WX45	F9XJ33	CSN4 COP9 signalosome complex subunit 4.	CPSF_A domain-containing protein.	0.850