(36 nodes) Mixed, incl. Ribonuclease MRP complex, and DNA integration network (Zymoseptoria tritici IPO323)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F9WX88_ZYMTI	Uncharacterized protein. (319 aa)
	F9WY71_ZYMTI	Uncharacterized protein. (108 aa)
	F9WYG5_ZYMTI	Uncharacterized protein. (269 aa)
	F9X0W4_ZYMTI	Uncharacterized protein. (335 aa)
	F9X1Q4_ZYMTI	Uncharacterized protein. (762 aa)
	F9X281_ZYMTI	Integrase_H2C2 domain-containing protein. (289 aa)
	F9X3J0_ZYMTI	Uncharacterized protein. (668 aa)
	F9X3W2_ZYMTI	Uncharacterized protein. (106 aa)
	F9X511_ZYMTI	Uncharacterized protein. (1078 aa)
	F9X5P0_ZYMTI	Wsc4-like protein. (406 aa)
	F9X758_ZYMTI	DUF1996 domain-containing protein. (470 aa)
	F9X7V8_ZYMTI	Uncharacterized protein. (195 aa)
	F9XAI1_ZYMTI	Uncharacterized protein. (432 aa)
	F9XAR4_ZYMTI	Uncharacterized protein. (204 aa)
	F9XBL2_ZYMTI	Uncharacterized protein. (872 aa)
	F9XC05_ZYMTI	Uncharacterized protein. (331 aa)
	F9XC34_ZYMTI	Uncharacterized protein. (382 aa)
	F9XCV7_ZYMTI	Uncharacterized protein. (159 aa)
	F9XES6_ZYMTI	Ribonuclease P protein subunit. (233 aa)
	F9XG25_ZYMTI	WSC domain-containing protein. (1135 aa)
	F9XG63_ZYMTI	Uncharacterized protein. (243 aa)
	F9XH72_ZYMTI	Uncharacterized protein. (328 aa)
	F9XI66_ZYMTI	Uncharacterized protein. (275 aa)
	F9XIY6_ZYMTI	Uncharacterized protein. (329 aa)
	F9XJI0_ZYMTI	Uncharacterized protein. (262 aa)
	F9XJR2_ZYMTI	Uncharacterized protein. (192 aa)
	F9XKQ7_ZYMTI	Uncharacterized protein. (518 aa)
	F9XN97_ZYMTI	WSC domain-containing protein. (269 aa)
	F9XNB3_ZYMTI	Uncharacterized protein. (248 aa)
	F9XNC3_ZYMTI	Uncharacterized protein. (857 aa)
	MgAGN1	Putative alpha-1,3-glucanase. (437 aa)
	F9XPL1_ZYMTI	Uncharacterized protein. (167 aa)
	F9XR06_ZYMTI	Uncharacterized protein. (226 aa)
	F9XR08_ZYMTI	Uncharacterized protein. (545 aa)
	F9XRM8_ZYMTI	Uncharacterized protein. (985 aa)
	F9XRQ5_ZYMTI	Uncharacterized protein. (227 aa)

Your Current Organism:

Zymoseptoria tritici IPO323

NCBI taxonomy Id: 336722
Other names: Mycosphaerella graminicola IPO323, Z. tritici IPO323

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same PNG format, but at higher resolution

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F9WX88_ZYMTI	F9XAR4_ZYMTI	F9WX88	F9XAR4	Uncharacterized protein.	Uncharacterized protein.	0.996
F9WX88_ZYMTI	F9XBL2_ZYMTI	F9WX88	F9XBL2	Uncharacterized protein.	Uncharacterized protein.	0.958
F9WX88_ZYMTI	F9XC05_ZYMTI	F9WX88	F9XC05	Uncharacterized protein.	Uncharacterized protein.	0.998
F9WX88_ZYMTI	F9XES6_ZYMTI	F9WX88	F9XES6	Uncharacterized protein.	Ribonuclease P protein subunit.	0.997
F9WX88_ZYMTI	F9XI66_ZYMTI	F9WX88	F9XI66	Uncharacterized protein.	Uncharacterized protein.	0.947
F9WX88_ZYMTI	F9XJR2_ZYMTI	F9WX88	F9XJR2	Uncharacterized protein.	Uncharacterized protein.	0.996
F9WX88_ZYMTI	F9XNB3_ZYMTI	F9WX88	F9XNB3	Uncharacterized protein.	Uncharacterized protein.	0.733
F9WX88_ZYMTI	F9XPL1_ZYMTI	F9WX88	F9XPL1	Uncharacterized protein.	Uncharacterized protein.	0.900
F9WY71_ZYMTI	F9X3J0_ZYMTI	F9WY71	F9X3J0	Uncharacterized protein.	Uncharacterized protein.	0.471
F9WY71_ZYMTI	F9XC34_ZYMTI	F9WY71	F9XC34	Uncharacterized protein.	Uncharacterized protein.	0.412
F9WY71_ZYMTI	F9XKQ7_ZYMTI	F9WY71	F9XKQ7	Uncharacterized protein.	Uncharacterized protein.	0.488
F9X3J0_ZYMTI	F9WY71_ZYMTI	F9X3J0	F9WY71	Uncharacterized protein.	Uncharacterized protein.	0.471
F9X3J0_ZYMTI	F9XC34_ZYMTI	F9X3J0	F9XC34	Uncharacterized protein.	Uncharacterized protein.	0.483
F9X3J0_ZYMTI	F9XJI0_ZYMTI	F9X3J0	F9XJI0	Uncharacterized protein.	Uncharacterized protein.	0.442
F9X3J0_ZYMTI	F9XKQ7_ZYMTI	F9X3J0	F9XKQ7	Uncharacterized protein.	Uncharacterized protein.	0.483
F9X5P0_ZYMTI	F9XC34_ZYMTI	F9X5P0	F9XC34	Wsc4-like protein.	Uncharacterized protein.	0.412
F9X5P0_ZYMTI	F9XKQ7_ZYMTI	F9X5P0	F9XKQ7	Wsc4-like protein.	Uncharacterized protein.	0.412
F9X5P0_ZYMTI	F9XN97_ZYMTI	F9X5P0	F9XN97	Wsc4-like protein.	WSC domain-containing protein.	0.932
F9XAI1_ZYMTI	F9XAR4_ZYMTI	F9XAI1	F9XAR4	Uncharacterized protein.	Uncharacterized protein.	0.915
F9XAI1_ZYMTI	F9XBL2_ZYMTI	F9XAI1	F9XBL2	Uncharacterized protein.	Uncharacterized protein.	0.677