(21 nodes) Fatty acid beta-oxidation, and Pex, N-terminal network (Zymoseptoria tritici IPO323)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F9WXF6_ZYMTI	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (459 aa)
	F9WXR2_ZYMTI	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (444 aa)
	F9X1X5_ZYMTI	Uncharacterized protein. (330 aa)
	TH1	Beta ketoadipyl CoA thiolase, TH1; Belongs to the thiolase-like superfamily. Thiolase family. (401 aa)
	F9X6D7_ZYMTI	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (289 aa)
	TH2	Beta ketoadipyl CoA thiolase, TH2; Belongs to the thiolase-like superfamily. Thiolase family. (413 aa)
	F9X755_ZYMTI	Uncharacterized protein. (550 aa)
	F9X7B0_ZYMTI	Uncharacterized protein. (273 aa)
	F9X884_ZYMTI	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (686 aa)
	F9X8H1_ZYMTI	Uncharacterized protein. (404 aa)
	F9X8Y0_ZYMTI	Uncharacterized protein. (443 aa)
	F9XBV7_ZYMTI	MaoC-like domain-containing protein. (908 aa)
	F9XE99_ZYMTI	Uncharacterized protein. (423 aa)
	F9XEK8_ZYMTI	Uncharacterized protein. (627 aa)
	F9XG46_ZYMTI	RING-type domain-containing protein. (394 aa)
	F9XKG0_ZYMTI	Pex2_Pex12 domain-containing protein. (464 aa)
	TH3	Beta ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (412 aa)
	F9XNE1_ZYMTI	Uncharacterized protein. (273 aa)
	F9XNV5_ZYMTI	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (697 aa)
	F9XNW0_ZYMTI	Uncharacterized protein. (197 aa)
	F9XNY1_ZYMTI	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (461 aa)

Your Current Organism:

Zymoseptoria tritici IPO323

NCBI taxonomy Id: 336722
Other names: Mycosphaerella graminicola IPO323, Z. tritici IPO323

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F9WXF6_ZYMTI	F9WXR2_ZYMTI	F9WXF6	F9WXR2	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.793
F9WXF6_ZYMTI	F9X1X5_ZYMTI	F9WXF6	F9X1X5	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.720
F9WXF6_ZYMTI	F9X6D7_ZYMTI	F9WXF6	F9X6D7	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.706
F9WXF6_ZYMTI	F9X755_ZYMTI	F9WXF6	F9X755	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.885
F9WXF6_ZYMTI	F9X7B0_ZYMTI	F9WXF6	F9X7B0	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.993
F9WXF6_ZYMTI	F9X884_ZYMTI	F9WXF6	F9X884	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.982
F9WXF6_ZYMTI	F9X8H1_ZYMTI	F9WXF6	F9X8H1	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.558
F9WXF6_ZYMTI	F9X8Y0_ZYMTI	F9WXF6	F9X8Y0	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.558
F9WXF6_ZYMTI	F9XBV7_ZYMTI	F9WXF6	F9XBV7	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	MaoC-like domain-containing protein.	0.885
F9WXF6_ZYMTI	F9XE99_ZYMTI	F9WXF6	F9XE99	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.522
F9WXF6_ZYMTI	F9XEK8_ZYMTI	F9WXF6	F9XEK8	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.793
F9WXF6_ZYMTI	F9XG46_ZYMTI	F9WXF6	F9XG46	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	RING-type domain-containing protein.	0.968
F9WXF6_ZYMTI	F9XKG0_ZYMTI	F9WXF6	F9XKG0	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Pex2_Pex12 domain-containing protein.	0.963
F9WXF6_ZYMTI	F9XNE1_ZYMTI	F9WXF6	F9XNE1	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.993
F9WXF6_ZYMTI	F9XNV5_ZYMTI	F9WXF6	F9XNV5	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.982
F9WXF6_ZYMTI	F9XNW0_ZYMTI	F9WXF6	F9XNW0	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.827
F9WXF6_ZYMTI	F9XNY1_ZYMTI	F9WXF6	F9XNY1	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.985
F9WXF6_ZYMTI	TH1	F9WXF6	F9X514	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Beta ketoadipyl CoA thiolase, TH1; Belongs to the thiolase-like superfamily. Thiolase family.	0.966
F9WXF6_ZYMTI	TH2	F9WXF6	F9X6X0	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Beta ketoadipyl CoA thiolase, TH2; Belongs to the thiolase-like superfamily. Thiolase family.	0.966
F9WXF6_ZYMTI	TH3	F9WXF6	F9XKN1	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Beta ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	0.966