(21 nodes) DNA-directed DNA polymerase activity network (Zymoseptoria tritici IPO323)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F9XD09_ZYMTI	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1164 aa)
	F9XDF0_ZYMTI	BRCT domain-containing protein. (265 aa)
	F9XER7_ZYMTI	Uncharacterized protein. (502 aa)
	F9XJ93_ZYMTI	Uncharacterized protein. (426 aa)
	F9XJH4_ZYMTI	HORMA domain-containing protein. (230 aa)
	F9XMV1_ZYMTI	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2226 aa)
	F9XNC3_ZYMTI	Uncharacterized protein. (857 aa)
	F9XQB1_ZYMTI	DNA polymerase. (1595 aa)
	F9XR06_ZYMTI	Uncharacterized protein. (226 aa)
	F9XR08_ZYMTI	Uncharacterized protein. (545 aa)
	F9XRM8_ZYMTI	Uncharacterized protein. (985 aa)
	F9WZ69_ZYMTI	UmuC domain-containing protein. (653 aa)
	F9X084_ZYMTI	UmuC domain-containing protein. (596 aa)
	POLX1	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (590 aa)
	F9X281_ZYMTI	Integrase_H2C2 domain-containing protein. (289 aa)
	F9X4A1_ZYMTI	DNA polymerase. (1107 aa)
	F9X4B1_ZYMTI	POLAc domain-containing protein. (1163 aa)
	POLX2	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (670 aa)
	F9X642_ZYMTI	UmuC domain-containing protein. (678 aa)
	F9X798_ZYMTI	DNA polymerase. (1478 aa)
	F9X7T7_ZYMTI	UmuC domain-containing protein. (479 aa)

Your Current Organism:

Zymoseptoria tritici IPO323

NCBI taxonomy Id: 336722
Other names: Mycosphaerella graminicola IPO323, Z. tritici IPO323

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F9WZ69_ZYMTI	F9X084_ZYMTI	F9WZ69	F9X084	UmuC domain-containing protein.	UmuC domain-containing protein.	0.688
F9WZ69_ZYMTI	F9X4A1_ZYMTI	F9WZ69	F9X4A1	UmuC domain-containing protein.	DNA polymerase.	0.717
F9WZ69_ZYMTI	F9X642_ZYMTI	F9WZ69	F9X642	UmuC domain-containing protein.	UmuC domain-containing protein.	0.797
F9WZ69_ZYMTI	F9X798_ZYMTI	F9WZ69	F9X798	UmuC domain-containing protein.	DNA polymerase.	0.437
F9WZ69_ZYMTI	F9X7T7_ZYMTI	F9WZ69	F9X7T7	UmuC domain-containing protein.	UmuC domain-containing protein.	0.797
F9WZ69_ZYMTI	F9XD09_ZYMTI	F9WZ69	F9XD09	UmuC domain-containing protein.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.914
F9WZ69_ZYMTI	F9XDF0_ZYMTI	F9WZ69	F9XDF0	UmuC domain-containing protein.	BRCT domain-containing protein.	0.902
F9WZ69_ZYMTI	F9XER7_ZYMTI	F9WZ69	F9XER7	UmuC domain-containing protein.	Uncharacterized protein.	0.690
F9WZ69_ZYMTI	F9XJH4_ZYMTI	F9WZ69	F9XJH4	UmuC domain-containing protein.	HORMA domain-containing protein.	0.861
F9WZ69_ZYMTI	F9XMV1_ZYMTI	F9WZ69	F9XMV1	UmuC domain-containing protein.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.735
F9WZ69_ZYMTI	F9XQB1_ZYMTI	F9WZ69	F9XQB1	UmuC domain-containing protein.	DNA polymerase.	0.890
F9X084_ZYMTI	F9WZ69_ZYMTI	F9X084	F9WZ69	UmuC domain-containing protein.	UmuC domain-containing protein.	0.688
F9X084_ZYMTI	F9X4A1_ZYMTI	F9X084	F9X4A1	UmuC domain-containing protein.	DNA polymerase.	0.557
F9X084_ZYMTI	F9X798_ZYMTI	F9X084	F9X798	UmuC domain-containing protein.	DNA polymerase.	0.437
F9X084_ZYMTI	F9XD09_ZYMTI	F9X084	F9XD09	UmuC domain-containing protein.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.730
F9X084_ZYMTI	F9XDF0_ZYMTI	F9X084	F9XDF0	UmuC domain-containing protein.	BRCT domain-containing protein.	0.698
F9X084_ZYMTI	F9XER7_ZYMTI	F9X084	F9XER7	UmuC domain-containing protein.	Uncharacterized protein.	0.469
F9X084_ZYMTI	F9XJH4_ZYMTI	F9X084	F9XJH4	UmuC domain-containing protein.	HORMA domain-containing protein.	0.836
F9X084_ZYMTI	F9XMV1_ZYMTI	F9X084	F9XMV1	UmuC domain-containing protein.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.545
F9X084_ZYMTI	F9XQB1_ZYMTI	F9X084	F9XQB1	UmuC domain-containing protein.	DNA polymerase.	0.831