(52 nodes) Ribonuclease activity network (Zymoseptoria tritici IPO323)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F9XJB6_ZYMTI	tRNA_int_endo domain-containing protein. (430 aa)
	F9XIY6_ZYMTI	Uncharacterized protein. (329 aa)
	F9XIQ1_ZYMTI	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (430 aa)
	F9XIF9_ZYMTI	Uncharacterized protein. (337 aa)
	F9XI97_ZYMTI	tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...] (464 aa)
	F9WX62_ZYMTI	Piwi domain-containing protein. (1136 aa)
	F9WX88_ZYMTI	Uncharacterized protein. (319 aa)
	F9XCJ7_ZYMTI	RNase H domain-containing protein. (173 aa)
	F9XPL1_ZYMTI	Uncharacterized protein. (167 aa)
	F9XNB3_ZYMTI	Uncharacterized protein. (248 aa)
	F9XNA8_ZYMTI	Endo/exonuclease/phosphatase domain-containing protein. (692 aa)
	F9XN70_ZYMTI	Uncharacterized protein; Belongs to the argonaute family. (809 aa)
	F9WYB6_ZYMTI	Exonuclease domain-containing protein. (728 aa)
	F9X0B1_ZYMTI	RNB domain-containing protein. (1506 aa)
	F9X0M5_ZYMTI	Piwi domain-containing protein. (1184 aa)
	F9X0R8_ZYMTI	S1 motif domain-containing protein; Belongs to the RNR ribonuclease family. (993 aa)
	F9X2A5_ZYMTI	Uncharacterized protein. (855 aa)
	F9X317_ZYMTI	Uncharacterized protein. (930 aa)
	F9XHI4_ZYMTI	Uncharacterized protein. (364 aa)
	F9XH40_ZYMTI	Uncharacterized protein. (88 aa)
	F9XGD9_ZYMTI	PINc domain-containing protein. (196 aa)
	F9X3H9_ZYMTI	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (331 aa)
	F9X3N1_ZYMTI	Uncharacterized protein. (310 aa)
	F9X5I4_ZYMTI	Endonuclease. (346 aa)
	F9X686_ZYMTI	Uncharacterized protein. (677 aa)
	F9X693_ZYMTI	Uncharacterized protein. (137 aa)
	F9X768_ZYMTI	Exonuclease domain-containing protein. (203 aa)
	F9X805_ZYMTI	Nudix hydrolase domain-containing protein. (380 aa)
	F9XHR8_ZYMTI	RNase III domain-containing protein. (327 aa)
	F9XHP0_ZYMTI	Uncharacterized protein; Belongs to the RNase T2 family. (316 aa)
	F9XHI5_ZYMTI	Uncharacterized protein. (335 aa)
	F9XFY1_ZYMTI	Uncharacterized protein. (1169 aa)
	F9XFX4_ZYMTI	Uncharacterized protein. (407 aa)
	F9XF31_ZYMTI	3'-5' exonuclease domain-containing protein. (421 aa)
	F9X807_ZYMTI	Uncharacterized protein; Belongs to the argonaute family. (987 aa)
	F9X883_ZYMTI	Uncharacterized protein. (263 aa)
	F9X9X8_ZYMTI	Protein kinase domain-containing protein. (252 aa)
	F9XAR4_ZYMTI	Uncharacterized protein. (204 aa)
	PAN2	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] (1147 aa)
	F9XBL2_ZYMTI	Uncharacterized protein. (872 aa)
	F9XBN8_ZYMTI	Uncharacterized protein. (274 aa)
	F9XBY5_ZYMTI	Uncharacterized protein. (275 aa)
	F9XC05_ZYMTI	Uncharacterized protein. (331 aa)
	F9XC07_ZYMTI	Uncharacterized protein. (402 aa)
	MgPel2	Putative pectate lyase. (342 aa)
	F9XJR2_ZYMTI	Uncharacterized protein. (192 aa)
	DCL2401	DsRNA-specific nuclease; Belongs to the helicase family. Dicer subfamily. (1537 aa)
	F9XL76_ZYMTI	RNase III domain-containing protein. (513 aa)
	F9XML9_ZYMTI	HRDC domain-containing protein. (796 aa)
	F9XMX5_ZYMTI	Uncharacterized protein; Belongs to the RNase T2 family. (404 aa)
	F9XJJ7_ZYMTI	tRNA_int_end_N2 domain-containing protein. (426 aa)
	F9XJJ6_ZYMTI	DBR1 domain-containing protein. (450 aa)

Your Current Organism:

Zymoseptoria tritici IPO323

NCBI taxonomy Id: 336722
Other names: Mycosphaerella graminicola IPO323, Z. tritici IPO323

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DCL2401	F9WX62_ZYMTI	F9XK11	F9WX62	DsRNA-specific nuclease; Belongs to the helicase family. Dicer subfamily.	Piwi domain-containing protein.	0.840
DCL2401	F9X0M5_ZYMTI	F9XK11	F9X0M5	DsRNA-specific nuclease; Belongs to the helicase family. Dicer subfamily.	Piwi domain-containing protein.	0.840
DCL2401	F9X317_ZYMTI	F9XK11	F9X317	DsRNA-specific nuclease; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein.	0.400
DCL2401	F9X807_ZYMTI	F9XK11	F9X807	DsRNA-specific nuclease; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein; Belongs to the argonaute family.	0.840
DCL2401	F9XF31_ZYMTI	F9XK11	F9XF31	DsRNA-specific nuclease; Belongs to the helicase family. Dicer subfamily.	3'-5' exonuclease domain-containing protein.	0.583
DCL2401	F9XHI4_ZYMTI	F9XK11	F9XHI4	DsRNA-specific nuclease; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein.	0.412
DCL2401	F9XHI5_ZYMTI	F9XK11	F9XHI5	DsRNA-specific nuclease; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein.	0.412
DCL2401	F9XHR8_ZYMTI	F9XK11	F9XHR8	DsRNA-specific nuclease; Belongs to the helicase family. Dicer subfamily.	RNase III domain-containing protein.	0.645
DCL2401	F9XJJ6_ZYMTI	F9XK11	F9XJJ6	DsRNA-specific nuclease; Belongs to the helicase family. Dicer subfamily.	DBR1 domain-containing protein.	0.483
DCL2401	F9XN70_ZYMTI	F9XK11	F9XN70	DsRNA-specific nuclease; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein; Belongs to the argonaute family.	0.911
F9WX62_ZYMTI	DCL2401	F9WX62	F9XK11	Piwi domain-containing protein.	DsRNA-specific nuclease; Belongs to the helicase family. Dicer subfamily.	0.840
F9WX62_ZYMTI	F9X883_ZYMTI	F9WX62	F9X883	Piwi domain-containing protein.	Uncharacterized protein.	0.571
F9WX62_ZYMTI	F9XHR8_ZYMTI	F9WX62	F9XHR8	Piwi domain-containing protein.	RNase III domain-containing protein.	0.665
F9WX62_ZYMTI	F9XL76_ZYMTI	F9WX62	F9XL76	Piwi domain-containing protein.	RNase III domain-containing protein.	0.617
F9WX88_ZYMTI	F9XAR4_ZYMTI	F9WX88	F9XAR4	Uncharacterized protein.	Uncharacterized protein.	0.996
F9WX88_ZYMTI	F9XBL2_ZYMTI	F9WX88	F9XBL2	Uncharacterized protein.	Uncharacterized protein.	0.958
F9WX88_ZYMTI	F9XC05_ZYMTI	F9WX88	F9XC05	Uncharacterized protein.	Uncharacterized protein.	0.998
F9WX88_ZYMTI	F9XI97_ZYMTI	F9WX88	F9XI97	Uncharacterized protein.	tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]	0.410
F9WX88_ZYMTI	F9XJR2_ZYMTI	F9WX88	F9XJR2	Uncharacterized protein.	Uncharacterized protein.	0.996
F9WX88_ZYMTI	F9XNB3_ZYMTI	F9WX88	F9XNB3	Uncharacterized protein.	Uncharacterized protein.	0.733