(12 nodes) Ras protein signal transduction network (Zymoseptoria tritici IPO323)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F9X588_ZYMTI	Uncharacterized protein. (693 aa)
	F9XL93_ZYMTI	Guanine-nucleotide dissociation stimulator CDC25. (1144 aa)
	MgSrv2	Adenylyl cyclase-associated protein; Belongs to the CAP family. (547 aa)
	F9XJX6_ZYMTI	Uncharacterized protein. (197 aa)
	MgRas2	Uncharacterized protein. (215 aa)
	MgRas1	Ras small GTPase. (196 aa)
	F9X7L2_ZYMTI	Rho type ras small GTPase-like protein. (217 aa)
	MgCdc42	Uncharacterized protein. (201 aa)
	F9X2E0_ZYMTI	Uncharacterized protein. (196 aa)
	F9X2D9_ZYMTI	Uncharacterized protein. (170 aa)
	F9X0J7_ZYMTI	Uncharacterized protein. (691 aa)
	F9WWE5_ZYMTI	Uncharacterized protein. (295 aa)

Your Current Organism:

Zymoseptoria tritici IPO323

NCBI taxonomy Id: 336722
Other names: Mycosphaerella graminicola IPO323, Z. tritici IPO323

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F9X0J7_ZYMTI	F9X2D9_ZYMTI	F9X0J7	F9X2D9	Uncharacterized protein.	Uncharacterized protein.	0.455
F9X0J7_ZYMTI	F9X2E0_ZYMTI	F9X0J7	F9X2E0	Uncharacterized protein.	Uncharacterized protein.	0.455
F9X0J7_ZYMTI	F9X7L2_ZYMTI	F9X0J7	F9X7L2	Uncharacterized protein.	Rho type ras small GTPase-like protein.	0.455
F9X0J7_ZYMTI	MgRas1	F9X0J7	F9XD41	Uncharacterized protein.	Ras small GTPase.	0.455
F9X0J7_ZYMTI	MgRas2	F9X0J7	F9XIZ8	Uncharacterized protein.	Uncharacterized protein.	0.455
F9X2D9_ZYMTI	F9X0J7_ZYMTI	F9X2D9	F9X0J7	Uncharacterized protein.	Uncharacterized protein.	0.455
F9X2D9_ZYMTI	F9XJX6_ZYMTI	F9X2D9	F9XJX6	Uncharacterized protein.	Uncharacterized protein.	0.513
F9X2D9_ZYMTI	F9XL93_ZYMTI	F9X2D9	F9XL93	Uncharacterized protein.	Guanine-nucleotide dissociation stimulator CDC25.	0.643
F9X2D9_ZYMTI	MgCdc42	F9X2D9	F9X554	Uncharacterized protein.	Uncharacterized protein.	0.424
F9X2E0_ZYMTI	F9X0J7_ZYMTI	F9X2E0	F9X0J7	Uncharacterized protein.	Uncharacterized protein.	0.455
F9X2E0_ZYMTI	F9XJX6_ZYMTI	F9X2E0	F9XJX6	Uncharacterized protein.	Uncharacterized protein.	0.513
F9X2E0_ZYMTI	F9XL93_ZYMTI	F9X2E0	F9XL93	Uncharacterized protein.	Guanine-nucleotide dissociation stimulator CDC25.	0.643
F9X2E0_ZYMTI	MgCdc42	F9X2E0	F9X554	Uncharacterized protein.	Uncharacterized protein.	0.424
F9X7L2_ZYMTI	F9X0J7_ZYMTI	F9X7L2	F9X0J7	Rho type ras small GTPase-like protein.	Uncharacterized protein.	0.455
F9X7L2_ZYMTI	F9XJX6_ZYMTI	F9X7L2	F9XJX6	Rho type ras small GTPase-like protein.	Uncharacterized protein.	0.513
F9X7L2_ZYMTI	F9XL93_ZYMTI	F9X7L2	F9XL93	Rho type ras small GTPase-like protein.	Guanine-nucleotide dissociation stimulator CDC25.	0.643
F9X7L2_ZYMTI	MgCdc42	F9X7L2	F9X554	Rho type ras small GTPase-like protein.	Uncharacterized protein.	0.424
F9XJX6_ZYMTI	F9X2D9_ZYMTI	F9XJX6	F9X2D9	Uncharacterized protein.	Uncharacterized protein.	0.513
F9XJX6_ZYMTI	F9X2E0_ZYMTI	F9XJX6	F9X2E0	Uncharacterized protein.	Uncharacterized protein.	0.513
F9XJX6_ZYMTI	F9X7L2_ZYMTI	F9XJX6	F9X7L2	Uncharacterized protein.	Rho type ras small GTPase-like protein.	0.513