(25 nodes) Cytoplasmic stress granule network (Zymoseptoria tritici IPO323)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F9X1W6_ZYMTI	Uncharacterized protein. (661 aa)
	F9XHI5_ZYMTI	Uncharacterized protein. (335 aa)
	F9XHI4_ZYMTI	Uncharacterized protein. (364 aa)
	PRT1	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (742 aa)
	F9XF44_ZYMTI	Uncharacterized protein. (144 aa)
	F9XE62_ZYMTI	Uncharacterized protein. (1060 aa)
	F9XDW8_ZYMTI	AD domain-containing protein. (234 aa)
	NIP1	Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (870 aa)
	F9X6Y3_ZYMTI	Uncharacterized protein. (145 aa)
	F9X6Y2_ZYMTI	MIF4G domain-containing protein. (676 aa)
	F9X645_ZYMTI	Uncharacterized protein. (763 aa)
	F9X4R8_ZYMTI	Uncharacterized protein. (173 aa)
	F9X266_ZYMTI	Uncharacterized protein. (590 aa)
	F9WWH6_ZYMTI	Uncharacterized protein. (518 aa)
	F9WWX1_ZYMTI	HTH La-type RNA-binding domain-containing protein. (1169 aa)
	F9WY00_ZYMTI	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (252 aa)
	F9X1R8_ZYMTI	Uncharacterized protein. (58 aa)
	F9X1R9_ZYMTI	Uncharacterized protein. (401 aa)
	F9XHX8_ZYMTI	eRF1_1 domain-containing protein. (434 aa)
	F9XI57_ZYMTI	RRM_2 domain-containing protein. (1056 aa)
	F9XJ81_ZYMTI	PAT1 domain-containing protein. (784 aa)
	Pkc1b	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (1167 aa)
	F9XN89_ZYMTI	Uncharacterized protein; Belongs to the DEAD box helicase family. (504 aa)
	F9XNV0_ZYMTI	LsmAD domain-containing protein. (954 aa)
	F9XHM0_ZYMTI	Uncharacterized protein. (300 aa)

Your Current Organism:

Zymoseptoria tritici IPO323

NCBI taxonomy Id: 336722
Other names: Mycosphaerella graminicola IPO323, Z. tritici IPO323

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F9WWX1_ZYMTI	F9WY00_ZYMTI	F9WWX1	F9WY00	HTH La-type RNA-binding domain-containing protein.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.445
F9WWX1_ZYMTI	F9X1W6_ZYMTI	F9WWX1	F9X1W6	HTH La-type RNA-binding domain-containing protein.	Uncharacterized protein.	0.436
F9WWX1_ZYMTI	F9X645_ZYMTI	F9WWX1	F9X645	HTH La-type RNA-binding domain-containing protein.	Uncharacterized protein.	0.699
F9WWX1_ZYMTI	F9X6Y2_ZYMTI	F9WWX1	F9X6Y2	HTH La-type RNA-binding domain-containing protein.	MIF4G domain-containing protein.	0.436
F9WWX1_ZYMTI	F9X6Y3_ZYMTI	F9WWX1	F9X6Y3	HTH La-type RNA-binding domain-containing protein.	Uncharacterized protein.	0.436
F9WY00_ZYMTI	F9WWX1_ZYMTI	F9WY00	F9WWX1	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	HTH La-type RNA-binding domain-containing protein.	0.445
F9WY00_ZYMTI	F9X1R8_ZYMTI	F9WY00	F9X1R8	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein.	0.522
F9WY00_ZYMTI	F9X1R9_ZYMTI	F9WY00	F9X1R9	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein.	0.522
F9WY00_ZYMTI	F9X1W6_ZYMTI	F9WY00	F9X1W6	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein.	0.908
F9WY00_ZYMTI	F9X266_ZYMTI	F9WY00	F9X266	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein.	0.625
F9WY00_ZYMTI	F9X4R8_ZYMTI	F9WY00	F9X4R8	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein.	0.609
F9WY00_ZYMTI	F9X645_ZYMTI	F9WY00	F9X645	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein.	0.964
F9WY00_ZYMTI	F9X6Y2_ZYMTI	F9WY00	F9X6Y2	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	MIF4G domain-containing protein.	0.990
F9WY00_ZYMTI	F9X6Y3_ZYMTI	F9WY00	F9X6Y3	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein.	0.908
F9WY00_ZYMTI	F9XHI4_ZYMTI	F9WY00	F9XHI4	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein.	0.481
F9WY00_ZYMTI	F9XHI5_ZYMTI	F9WY00	F9XHI5	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein.	0.481
F9WY00_ZYMTI	F9XHX8_ZYMTI	F9WY00	F9XHX8	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	eRF1_1 domain-containing protein.	0.510
F9WY00_ZYMTI	F9XN89_ZYMTI	F9WY00	F9XN89	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.803
F9WY00_ZYMTI	F9XNV0_ZYMTI	F9WY00	F9XNV0	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	LsmAD domain-containing protein.	0.514
F9WY00_ZYMTI	NIP1	F9WY00	F9X7B1	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	0.568