(23 nodes) sno(s)RNA processing network (Zymoseptoria tritici IPO323)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PAFD2401	Paf1p complex subunit. (601 aa)
	F9WWI2_ZYMTI	Uncharacterized protein. (483 aa)
	F9WWI3_ZYMTI	RNase_PH domain-containing protein. (202 aa)
	F9WXN2_ZYMTI	Nop domain-containing protein. (572 aa)
	F9WXU1_ZYMTI	RNase_PH domain-containing protein. (250 aa)
	F9WZL9_ZYMTI	ECR1_N domain-containing protein. (311 aa)
	F9X2A5_ZYMTI	Uncharacterized protein. (855 aa)
	F9X2R6_ZYMTI	Uncharacterized protein. (87 aa)
	F9X2R7_ZYMTI	RRM domain-containing protein. (133 aa)
	F9X2Z8_ZYMTI	Uncharacterized protein. (328 aa)
	F9XLA4_ZYMTI	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (559 aa)
	F9XPL1_ZYMTI	Uncharacterized protein. (167 aa)
	F9XNB3_ZYMTI	Uncharacterized protein. (248 aa)
	F9XML9_ZYMTI	HRDC domain-containing protein. (796 aa)
	F9XMG8_ZYMTI	RRM domain-containing protein. (866 aa)
	F9XPS8_ZYMTI	Uncharacterized protein. (129 aa)
	F9XPM6_ZYMTI	Uncharacterized protein. (249 aa)
	F9XM82_ZYMTI	HAD_SAK_1 domain-containing protein. (502 aa)
	F9X7V0_ZYMTI	Uncharacterized protein. (319 aa)
	F9XBL2_ZYMTI	Uncharacterized protein. (872 aa)
	F9XHR8_ZYMTI	RNase III domain-containing protein. (327 aa)
	F9XIY6_ZYMTI	Uncharacterized protein. (329 aa)
	F9XJR2_ZYMTI	Uncharacterized protein. (192 aa)

Your Current Organism:

Zymoseptoria tritici IPO323

NCBI taxonomy Id: 336722
Other names: Mycosphaerella graminicola IPO323, Z. tritici IPO323

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F9WWI2_ZYMTI	F9WXN2_ZYMTI	F9WWI2	F9WXN2	Uncharacterized protein.	Nop domain-containing protein.	0.765
F9WWI2_ZYMTI	F9WXU1_ZYMTI	F9WWI2	F9WXU1	Uncharacterized protein.	RNase_PH domain-containing protein.	0.886
F9WWI2_ZYMTI	F9WZL9_ZYMTI	F9WWI2	F9WZL9	Uncharacterized protein.	ECR1_N domain-containing protein.	0.964
F9WWI2_ZYMTI	F9X2Z8_ZYMTI	F9WWI2	F9X2Z8	Uncharacterized protein.	Uncharacterized protein.	0.752
F9WWI2_ZYMTI	F9XPM6_ZYMTI	F9WWI2	F9XPM6	Uncharacterized protein.	Uncharacterized protein.	0.967
F9WWI2_ZYMTI	F9XPS8_ZYMTI	F9WWI2	F9XPS8	Uncharacterized protein.	Uncharacterized protein.	0.953
F9WWI3_ZYMTI	F9WXN2_ZYMTI	F9WWI3	F9WXN2	RNase_PH domain-containing protein.	Nop domain-containing protein.	0.819
F9WWI3_ZYMTI	F9WXU1_ZYMTI	F9WWI3	F9WXU1	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.999
F9WWI3_ZYMTI	F9WZL9_ZYMTI	F9WWI3	F9WZL9	RNase_PH domain-containing protein.	ECR1_N domain-containing protein.	0.999
F9WWI3_ZYMTI	F9X2Z8_ZYMTI	F9WWI3	F9X2Z8	RNase_PH domain-containing protein.	Uncharacterized protein.	0.809
F9WWI3_ZYMTI	F9XPM6_ZYMTI	F9WWI3	F9XPM6	RNase_PH domain-containing protein.	Uncharacterized protein.	0.999
F9WWI3_ZYMTI	F9XPS8_ZYMTI	F9WWI3	F9XPS8	RNase_PH domain-containing protein.	Uncharacterized protein.	0.998
F9WXN2_ZYMTI	F9WWI2_ZYMTI	F9WXN2	F9WWI2	Nop domain-containing protein.	Uncharacterized protein.	0.765
F9WXN2_ZYMTI	F9WWI3_ZYMTI	F9WXN2	F9WWI3	Nop domain-containing protein.	RNase_PH domain-containing protein.	0.819
F9WXN2_ZYMTI	F9WXU1_ZYMTI	F9WXN2	F9WXU1	Nop domain-containing protein.	RNase_PH domain-containing protein.	0.812
F9WXN2_ZYMTI	F9WZL9_ZYMTI	F9WXN2	F9WZL9	Nop domain-containing protein.	ECR1_N domain-containing protein.	0.829
F9WXN2_ZYMTI	F9X2Z8_ZYMTI	F9WXN2	F9X2Z8	Nop domain-containing protein.	Uncharacterized protein.	0.999
F9WXN2_ZYMTI	F9XPM6_ZYMTI	F9WXN2	F9XPM6	Nop domain-containing protein.	Uncharacterized protein.	0.820
F9WXN2_ZYMTI	F9XPS8_ZYMTI	F9WXN2	F9XPS8	Nop domain-containing protein.	Uncharacterized protein.	0.889
F9WXU1_ZYMTI	F9WWI2_ZYMTI	F9WXU1	F9WWI2	RNase_PH domain-containing protein.	Uncharacterized protein.	0.886