(9 nodes) Nuclear-transcribed mRNA catabolic process, 3-5 exonucleolytic nonsense-mediated decay network (Zymoseptoria tritici IPO323)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F9WWI3_ZYMTI	RNase_PH domain-containing protein. (202 aa)
	F9WXU1_ZYMTI	RNase_PH domain-containing protein. (250 aa)
	F9X1B2_ZYMTI	RNase_PH domain-containing protein. (354 aa)
	F9X5H7_ZYMTI	Uncharacterized protein. (292 aa)
	F9X7K0_ZYMTI	Uncharacterized protein. (1263 aa)
	F9X852_ZYMTI	RNase_PH domain-containing protein. (331 aa)
	F9XLM6_ZYMTI	Uncharacterized protein. (1147 aa)
	F9XMS5_ZYMTI	Uncharacterized protein. (1388 aa)
	F9XPB5_ZYMTI	WD_REPEATS_REGION domain-containing protein. (379 aa)

Your Current Organism:

Zymoseptoria tritici IPO323

NCBI taxonomy Id: 336722
Other names: Mycosphaerella graminicola IPO323, Z. tritici IPO323

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F9WWI3_ZYMTI	F9WXU1_ZYMTI	F9WWI3	F9WXU1	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.999
F9WWI3_ZYMTI	F9X1B2_ZYMTI	F9WWI3	F9X1B2	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.998
F9WWI3_ZYMTI	F9X5H7_ZYMTI	F9WWI3	F9X5H7	RNase_PH domain-containing protein.	Uncharacterized protein.	0.999
F9WWI3_ZYMTI	F9X7K0_ZYMTI	F9WWI3	F9X7K0	RNase_PH domain-containing protein.	Uncharacterized protein.	0.897
F9WWI3_ZYMTI	F9X852_ZYMTI	F9WWI3	F9X852	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.999
F9WWI3_ZYMTI	F9XMS5_ZYMTI	F9WWI3	F9XMS5	RNase_PH domain-containing protein.	Uncharacterized protein.	0.815
F9WWI3_ZYMTI	F9XPB5_ZYMTI	F9WWI3	F9XPB5	RNase_PH domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.772
F9WXU1_ZYMTI	F9WWI3_ZYMTI	F9WXU1	F9WWI3	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.999
F9WXU1_ZYMTI	F9X1B2_ZYMTI	F9WXU1	F9X1B2	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.999
F9WXU1_ZYMTI	F9X5H7_ZYMTI	F9WXU1	F9X5H7	RNase_PH domain-containing protein.	Uncharacterized protein.	0.999
F9WXU1_ZYMTI	F9X7K0_ZYMTI	F9WXU1	F9X7K0	RNase_PH domain-containing protein.	Uncharacterized protein.	0.897
F9WXU1_ZYMTI	F9X852_ZYMTI	F9WXU1	F9X852	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.999
F9WXU1_ZYMTI	F9XMS5_ZYMTI	F9WXU1	F9XMS5	RNase_PH domain-containing protein.	Uncharacterized protein.	0.853
F9WXU1_ZYMTI	F9XPB5_ZYMTI	F9WXU1	F9XPB5	RNase_PH domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.804
F9X1B2_ZYMTI	F9WWI3_ZYMTI	F9X1B2	F9WWI3	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.998
F9X1B2_ZYMTI	F9WXU1_ZYMTI	F9X1B2	F9WXU1	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.999
F9X1B2_ZYMTI	F9X5H7_ZYMTI	F9X1B2	F9X5H7	RNase_PH domain-containing protein.	Uncharacterized protein.	0.999
F9X1B2_ZYMTI	F9X7K0_ZYMTI	F9X1B2	F9X7K0	RNase_PH domain-containing protein.	Uncharacterized protein.	0.927
F9X1B2_ZYMTI	F9X852_ZYMTI	F9X1B2	F9X852	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.999
F9X1B2_ZYMTI	F9XMS5_ZYMTI	F9X1B2	F9XMS5	RNase_PH domain-containing protein.	Uncharacterized protein.	0.803